| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0287 |
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| Symbol | |
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| ID | 6160877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 304124 |
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| End bp | 304612 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663031 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_001789327 |
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| Protein GI | 171056978 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACG ATCCGGACAC CCTCTTCGCC CAATTCGCCG AACGCATCGG CTACCTGATC
GACCCCGGGA TCAAGGTCGG CGGCAACTAC ACCGCGGTCG TCGCCGATGG CGATCAGGTG
TTCGTCAGCG GCCAGACGCC GCGGGTGGGC GATCGCATGG CCTATACCGG CCGGGTAGGC
GCCGAGGTGG CGCTGGCCGA TGCGCAGCGC GCGGCGCAGA TCTGCGCCCT GCGCGCGCTG
ACCCTGCTGC AGCGCGAGCT GGGCACGCTG TCGCGGGTGC GCAAGATCCT GCGCGTCAAC
GTGTTCGTGC AGTGCAGCGC CGAGTTCACC CAGATCAGCG AAGTAGGCGA CGGCGCCTCG
GAGGTGTTCG CCACCGTGCT GGGCCCGGCC GGCCTGCACA CGCGCACCTC GGTGGGCGTG
TTCGCGCTGC CCAAGAACGC CGCGGTCGAG ATCGACCTGA TCGCCGCCGC GCAGCCGTTC
AACGCCTGA
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| Protein sequence | MKHDPDTLFA QFAERIGYLI DPGIKVGGNY TAVVADGDQV FVSGQTPRVG DRMAYTGRVG
AEVALADAQR AAQICALRAL TLLQRELGTL SRVRKILRVN VFVQCSAEFT QISEVGDGAS
EVFATVLGPA GLHTRTSVGV FALPKNAAVE IDLIAAAQPF NA
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