| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0273 |
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| Symbol | |
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| ID | 6160543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 287506 |
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| End bp | 288492 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663017 |
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| Product | transglutaminase domain-containing protein |
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| Protein accession | YP_001789313 |
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| Protein GI | 171056964 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.260289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGGC TCAAGATCTC GCACAAGACC GTCTACCGCT ACCGCGAGCC GGTGCAGTTC
AGCGAACACC GCTTCATGTG CCGGCCGCGT GACAGCCACG ACCTGCGGCT GCTGCACACC
GGCATCCGCA TCGTGCCGCA GCCGACCGTG CGCTGGGCCC ACGACGTCAA CGCCAACTCG
ATCCTGGTGG CGACCTTCGC GGAGCCGGCC GACGAGCTGA GCTTCGAGTC GACCTTCGTG
GCCGAGCATT TCCCGGTCGA GCCCGATGTC GACATGATCG AGGACTATGC CGAGCGCCTG
CCGTTCAGCT ACGAGGCACG CGAGATTCCC GATCTGGCCC GCAGCATCGA GCGCCACCAC
GCCGACCCGG GCCACCGCGT CGACGCCTGG GTGCGCGCCG TCTGTGCCGA GGCCGGCACC
GACAAGACGC TGGACGTGCT GATCGCCATC ACGCGCGCCA TCAAGGCGCA GTTCAGCTAC
GAATCGCGCG ACGAAGAAGG CACCCGCACG CCCACCGAAA CGCTCGCGCT CGGCAGCGGC
AGCTGTCGCG ATTTCGCGCT GTTCATGATG GAGGCGGTGC GCAGCCTGGG CCTGGCGGCA
CGCTTCGTGT CGGGCTATCT CTACGACGAC ACGCTGACCG ACGCCGCCGG CGGCGTGGTC
GGCGGCGGTG CGACCCATGC CTGGGTGCAC GTCTATCTGC CGGGCGCCGG CTGGCTGCCT
TTCGACCCGA CCAACGCCAT CATCGGCGGG CGCAACCTGA TCCGCGTCGC GGTGGCGCGC
GACCCGTCGC TGGCGGTGCC GCTGACCGGC AGTTACGTGG GCCCCAAGGA GGCCTACCTG
GGCATGACGG TCGAGGTCAC GGTGACGGTG GAGCCGGAAG CCGACGCAGC CGCGGCGGAT
GGCGACGAAC CCGCCGCTGC GCAGGCGGGC CCCGCATCGG TCGCAGCCCC CGCCGCCGCC
GCAGTCACGG CACCAGACGC CGCGTGA
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| Protein sequence | MARLKISHKT VYRYREPVQF SEHRFMCRPR DSHDLRLLHT GIRIVPQPTV RWAHDVNANS
ILVATFAEPA DELSFESTFV AEHFPVEPDV DMIEDYAERL PFSYEAREIP DLARSIERHH
ADPGHRVDAW VRAVCAEAGT DKTLDVLIAI TRAIKAQFSY ESRDEEGTRT PTETLALGSG
SCRDFALFMM EAVRSLGLAA RFVSGYLYDD TLTDAAGGVV GGGATHAWVH VYLPGAGWLP
FDPTNAIIGG RNLIRVAVAR DPSLAVPLTG SYVGPKEAYL GMTVEVTVTV EPEADAAAAD
GDEPAAAQAG PASVAAPAAA AVTAPDAA
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