Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0265 |
Symbol | |
ID | 6160510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 280523 |
End bp | 281725 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641663009 |
Product | hypothetical protein |
Protein accession | YP_001789305 |
Protein GI | 171056956 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0299204 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCCGAC CGGCGCTGGC CTGGGCCGCG CTGGCGGCGC TGCTGCTGCA CCTGCTGGCG CTCGACGAAC TGCACGAGTC GATGCAGTCG ATCGACTTCC AGAAGCCCGC GATGGAGCGC CTCGAGGCGG TCTACACCCG CGTGCTGGCG CCGGTCGAGC CGGTCGAGGT GTCCGCGCCG GCTGCGCGGC CGACGGCGCG TCGCGCCAAC CGCGCCGCGG TTGTGGCGGC AGCGGCTTCT GCGCCCGCCG AGGCCGCGTC TGCCGCGGCC GCGTCTGCGG CCGAGTCCGT TGCCCGTGCG GCCGACGAGG CCGCGTCCGC CGCGCTGGCC GGCATCGCGC CGGGCGTGGA CGAGGCGGCT TCGGCGCCGA CGGCCGACCT GGCCGCTGCG GCCGCCTCGG CCTCGGCTGC GGCGGGCGAA GCCGGGCCGG ACGGCTCCAC CGCCGGCGAG CCGGCCGCCA GTGCCGTGGC CCGGGCCGCG CCGGCCAGTG CGCCGGCCAG CCCCCAGGCG GGCGCATCGG CGCCGCTGCC GGCGTTCAGC TGGCCGGCTT CGACCCGCCT GAGCTACAAG CTCGACGGCT GGTACAACGG CGAGGTGCTC GGTCAGGCGC AGGTCGAGTG GCTGCGTCAC GGCGAGCGCT ATCAGGTGCA CCTGGATGTC TCGGTCGGCC CGAGCTTTGC GCCGCTGGTG CGCCGGCGCA TGAGCAGCGA TGGCCGCATC ACCGCCGACG GCCTGGCGCC GCAGCGCTAC GAGCAGGAGA CGACGCAGAT CATCGGCCGC GACCGGCGCG TGCAGATGGC CTTCAGCGAC ACCGCCATCG TGCTGTCCAA CGGCGAGCGG GTGCCCGCCC AGGCCGACGT GCAGGACACC GCCAGCCAGT TCATCCAGAT CATCTACCTG CTGACCACCC GGCCGGCGCT GCGCCAGGTC GGCCAGTCGA TCGAGTTCGG CCTGGCGCTG CCCAAGCGGG TCGACCGCTG GGTCTACGAG GTGGTCGAGC GGGTGGTGGT GGAGACCCCG CTCGGCCCGA TCCCGACCCT GCACGTCAAG CCGCGCCGCC GCGCCGCGCC CGGCAACCTG ACGGCGCAGA TGTGGTACGC GCCGAGCCTG CAGATGCTGC CGGTGCGCAT CCGCATCGAG CAGGACGAGG GCGTGTGGAT CGACCTGCGG CTCGAACGCG CGCCCGAACA ATCGGGCCCG TGA
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Protein sequence | MRRPALAWAA LAALLLHLLA LDELHESMQS IDFQKPAMER LEAVYTRVLA PVEPVEVSAP AARPTARRAN RAAVVAAAAS APAEAASAAA ASAAESVARA ADEAASAALA GIAPGVDEAA SAPTADLAAA AASASAAAGE AGPDGSTAGE PAASAVARAA PASAPASPQA GASAPLPAFS WPASTRLSYK LDGWYNGEVL GQAQVEWLRH GERYQVHLDV SVGPSFAPLV RRRMSSDGRI TADGLAPQRY EQETTQIIGR DRRVQMAFSD TAIVLSNGER VPAQADVQDT ASQFIQIIYL LTTRPALRQV GQSIEFGLAL PKRVDRWVYE VVERVVVETP LGPIPTLHVK PRRRAAPGNL TAQMWYAPSL QMLPVRIRIE QDEGVWIDLR LERAPEQSGP
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