| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0166 |
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| Symbol | |
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| ID | 6160410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 172841 |
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| End bp | 174235 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641662910 |
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| Product | glutamine synthetase, type III |
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| Protein accession | YP_001789206 |
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| Protein GI | 171056857 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0174] Glutamine synthetase |
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| TIGRFAM ID | [TIGR00653] glutamine synthetase, type I
[TIGR03105] glutamine synthetase, type III |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACACCG TAGCAGACCC CTTTTCAGCC CGGCCCTCGG CCGATCTGGT GACCCCGCAG
CGCTTCAGAA CCGTGGAGGA AACCCAGCGT CATCTCAAGT CCGAGGGCGT GAGCTACGTG
CTGGCGCAGT TCGTCGACAT CCACGGCGTG GCCAAGGCCA AGTCGGTGCC GGTCGAACAC
CTGAACACCG TGATGACCGA CGGCGCGGGC TTTGCCGGCT TCGCGATCTG CGGCGTCGGC
ATCGAGCCGC ACGGGCCTGA TTTCATGGCC GTGGGCGATC TCTCGACCGT GTCGGTCGTG
CCCTGGCAGC CGGGCCTGGC GCGCATCGTC TGCGAGGGCC ATGTCGAGGG CGAGCCCTGG
CAGTTCGACA GCCGTGTCGT GCTCAAGAAG CAGGTCGAGC GCCTGAGTTC GCAGGGCCTG
ACGATGTTCA CCGGCCTGGA GCCCGAGTTC TCGCTGCTGC GCCGCAATGC CGACGGCACG
ATCGTGCCGC ACGACGCCAG CGACAACCTC GCCAAGCCCT GCTACGACTA CAAGGGCCTG
TCGCGCACCC GCGTGTTCCT GGAGCGGCTG TCGAACGCGA TGCGCGCCAC CGGCATCGAC
GTCTATCAGA TCGACCATGA AGACGCCAAC GGCCAGTTCG AGCTGAACTA CACCTACACC
GACTGCCTGA CCTCCTGCGA CCACTTCATC TTCTTCAAGA TGGCGGCCAG CGAGATCGCC
AATGAGCTGG GCCTGATCTG CTCCTTCATG CCCAAGCCCT TTGCCAATCG GCCGGGCAAT
GGCATGCACA TGCACCTGTC CATCGGCGAC GGCAAGCGCA ATCTCTTTCA GGACAAGAGC
GACCCGAACG GGCTGGAGCT CTCGCCGATG GCTTACCAGT TCATGGCCGG CCTGCTGCAC
CACGCGCCCG CATTGACGGC GTTGTGCGCG CCGACCATCA ACTCGTACAA GCGCCTGGTG
GTGGGCCGCT CGCTGACCGG TGCGACCTGG GCGCCGGCCT ACATCAGCTA CGGCGACAAC
AACCGCTCGA CCATGGTGCG CATCCCGAAA GGCCGGCTCG AACTGCGCCT GCCCGACGGG
GCCTGCAATC CCTATCTGGC GACGGCCGCG GTGATTGCCG CGGGCCTCGA CGGCATCGAG
AAGCGCATGG ACCCGGGCAC GCCGCGCAAC GTCAATCTCT ACGAGTGGAG CGAGGCGCAA
TTGAAGGAGG CCGGCATCGG CCTGCTGCCG CAGAACCTCA ATGCCGCACT CGACGCATTG
GAAGGCGACA GCGTCATTCG CGAGGCACTC GGCCCGGTGA CGGGGGAGTT CCTGAAGTTC
AAGCGCATGG AATGGCTCGA GTACATGCGC CACGTCTCCG AATGGGAAGT CAAGCAGTAC
CTCGAGTTTT TCTGA
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| Protein sequence | MNTVADPFSA RPSADLVTPQ RFRTVEETQR HLKSEGVSYV LAQFVDIHGV AKAKSVPVEH
LNTVMTDGAG FAGFAICGVG IEPHGPDFMA VGDLSTVSVV PWQPGLARIV CEGHVEGEPW
QFDSRVVLKK QVERLSSQGL TMFTGLEPEF SLLRRNADGT IVPHDASDNL AKPCYDYKGL
SRTRVFLERL SNAMRATGID VYQIDHEDAN GQFELNYTYT DCLTSCDHFI FFKMAASEIA
NELGLICSFM PKPFANRPGN GMHMHLSIGD GKRNLFQDKS DPNGLELSPM AYQFMAGLLH
HAPALTALCA PTINSYKRLV VGRSLTGATW APAYISYGDN NRSTMVRIPK GRLELRLPDG
ACNPYLATAA VIAAGLDGIE KRMDPGTPRN VNLYEWSEAQ LKEAGIGLLP QNLNAALDAL
EGDSVIREAL GPVTGEFLKF KRMEWLEYMR HVSEWEVKQY LEFF
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