| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0160 |
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| Symbol | |
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| ID | 6162580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 167344 |
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| End bp | 168375 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641662904 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001789200 |
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| Protein GI | 171056851 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCAT CCGCCCCTGG CTCCCGCAAC ACCCGCAACG CCCGCCGCTC GCGCCGGCTG
CCCGACCTGC ACTCGCTCGA AGCCTTCGTG GCGGTGTGCG ACTCGGGTTC GATGGTGATG
GCCGCCCAGT TGCTGGGCCT GAGCCAGAGC GCCATCAGCC AGTCGATCAA GGCGCTGGAG
ACCGAACTCG AACTGCAGCT GTTCGACCGC GAGGTGCGCC CCGCCGTCAC CACCCACGCC
GGCCGCGCGC TGCGCGAGCG CGCCACCGAG CTGCTGACCC AGGCGCGCGC GATGGTCGAC
CAGGTGCGCG CCACCGCGCG CCATGAACAC ACGCATATCC ACCTCGGCTG CGTCGACTCG
TTCGCGGCCA CCGTGGGGCC GCGGCTGATC CGCGCGATGT CGGGCTCGGC GCAGCAGATC
CTGATGTGGT CCGGGCTGAC GCCGATGCTG ATCGAGCAGC TGCGCGGGCG CGAGCTGGAC
TTCGCGATCT GCACCGACGC GGCCATCGAC GACCCGCGCA TCGTGCCGCG GCTGCTGTGC
TCCGAATCGT GGGTGGCGGT GTTCCCGCGC GCGCACCCGG TGCGCTCGCT GCAGTCGGCG
CGTGAGCTGG CGGAGCTGCC CGGCAGCCTG CCGCTGATCC GCTACAGCCA GCGTTCGGTG
ATCGGCCAGC AGGTCGAGCG CTTCCTGCGC CATGTGGGCG TGCAGGCGCC GCGCAGCTAC
GAGTTCGACG CCACCGACCC GCTGCTGAGC CTGGTCGCAT CCGGCCTGGG CTGGGCGCTG
AGCACGCCGC TGTGCCTGTG GCAGTCGCGC CAGTATCTGG ACGACGTGAC CGTGCTGCCG
CTGCCGCCCA CCCGGCTCGG CCAGCGCCAT TTCCACCTGC TGTCGCGCGA GGACGAATGG
GCCGGCCTCG ACCAGCGCAT CGCCCGCGTC ACCCGCGACG TGATCCGCCA GGAGACCGGC
CCCGCCATCC GCCTGCGCAT GCCCGCGCTG CCCGCCGACG CTCTTTTCTG TCCCGACGAG
GAGACCTCAT GA
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| Protein sequence | MPPSAPGSRN TRNARRSRRL PDLHSLEAFV AVCDSGSMVM AAQLLGLSQS AISQSIKALE
TELELQLFDR EVRPAVTTHA GRALRERATE LLTQARAMVD QVRATARHEH THIHLGCVDS
FAATVGPRLI RAMSGSAQQI LMWSGLTPML IEQLRGRELD FAICTDAAID DPRIVPRLLC
SESWVAVFPR AHPVRSLQSA RELAELPGSL PLIRYSQRSV IGQQVERFLR HVGVQAPRSY
EFDATDPLLS LVASGLGWAL STPLCLWQSR QYLDDVTVLP LPPTRLGQRH FHLLSREDEW
AGLDQRIARV TRDVIRQETG PAIRLRMPAL PADALFCPDE ETS
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