| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0143 |
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| Symbol | |
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| ID | 6163744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 146802 |
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| End bp | 147908 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641662887 |
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| Product | hypothetical protein |
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| Protein accession | YP_001789183 |
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| Protein GI | 171056834 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAATCA TCCTCACCCT CCTGAGCCTG GCCCTCGTCG CCACGGCCCA TGCCGGCCCC
GGGGCGCACG GCCCCAACGG CGAGCACCTC GACACGCCCA GCGTGAGCAC GCCCGACGGC
CTGGCACGCC TGCCCGATGG CAGCGTGAAC GTGCCGATGC TGGCGCAGCG GCGCTTGGGC
CTGCGCACGC TGCTGGCGGT CGAAAGCGAT GCCGCCGCTA CCGTGGAACT GCCCGCGCGG
GTCGTCATGG ACCCCAATTC GGCGGGCCGG GTGCAGACGC TCATCGGCGG CAAGGTCGAG
CCCGGCCCCA AGGGCCTGCC GATCGCCGGA CAGCGGGTGC GCCGTGGTGA CGTGCTGGGT
TACGTGGCCC ACCATGTCGA CCCGCTGGCC GCGGCCAGCC AGCAGGCCCA GCTCGTGGAG
CTGCGCAGCA GCCGCCAGCT GGCCGAGCAG CGGGTCCAGC GCCTGCAGTC GCTCGAAGGC
ACGGTGCCGC GCAAGGAGAT CGACGCGGCC AAGCTGGAGC TGGACAGCTA CACCGCCCGC
GAAAACGCCA TCGGCGCCAG CCTGGGCAGC AAGGAGCGGC TGGTCGCGCC GGTTTCGGGC
GTCATCGCGC GCGCCGACGT CGTCAACGGC CAGGTTGTCG AATCCAAGGA CGTGCTGTTC
GAGGTGATCG ACCCGGCCCG CATGCTGATC GAAGCGAGCG TGGCCGACGT CAAGCTGAGC
ACGCAGCTGG CCGGCGCCAC GCTGGCGGGC ATCGCCGACT GGAAGCTGCA GTTCCTTGGC
GCGGCCGGTG CGCTGCGCGA CGGCACCCTG CCGCTGACCT TCAAGGCGAC CGGAACCGGC
GCCACGCCGC TGGCCCTCGG CCAGCCGGTG ACCGTGGTGG CGGCGCTCAC CAACAAGGTC
AAGGGCATCG TGCTGCCCGC GCAGGCGGTG ACGCGCAATT CGGCCAACGA GACTGTGGTC
TGGATCAAGG CCGGCGCCGA GCGCTACATC CCGCAGCCGG TGCAGGTTCG ACCGCTCGAT
GCGCAGACCG TCGTGATCAC GCAGGGGCTC GGTGCCGACA ACCGGGTGGT CGTGCAGGGC
GCGCCGCTGA TCGCGCAGAT TCGCTGA
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| Protein sequence | MKIILTLLSL ALVATAHAGP GAHGPNGEHL DTPSVSTPDG LARLPDGSVN VPMLAQRRLG
LRTLLAVESD AAATVELPAR VVMDPNSAGR VQTLIGGKVE PGPKGLPIAG QRVRRGDVLG
YVAHHVDPLA AASQQAQLVE LRSSRQLAEQ RVQRLQSLEG TVPRKEIDAA KLELDSYTAR
ENAIGASLGS KERLVAPVSG VIARADVVNG QVVESKDVLF EVIDPARMLI EASVADVKLS
TQLAGATLAG IADWKLQFLG AAGALRDGTL PLTFKATGTG ATPLALGQPV TVVAALTNKV
KGIVLPAQAV TRNSANETVV WIKAGAERYI PQPVQVRPLD AQTVVITQGL GADNRVVVQG
APLIAQIR
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