Gene Lcho_0142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0142 
Symbol 
ID6162943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp146182 
End bp146805 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content69% 
IMG OID641662886 
Producthypothetical protein 
Protein accessionYP_001789182 
Protein GI171056833 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCAT CCCTTTCTTT CGTGCGCCAA GGCCTGCTGG CCTTGGCGCT CGCCATCTCG 
TTTCCGCCAC TTCATGCCGG CCCGGGCGCC CATGGCCCGA ACGGCGAACA CCTCGACTCG 
CCGGCACCGG CGACCGCCCG TTCAAGCACC AGCCCCCGCT TTGAAACCAG GACCGAGGCC 
TTCGAGATGG TCGGGCGGCT GGAGGGTGGT GAACTGACGC TGTTCATCAA CCGCTTCGAG 
ACCAACGAGC CGGTGCTGGA CGCCCAGGTC GAACTCGAGT CCGGCGCACT CAAGGTGAAA 
GCACCGTTCC TGGCCGACCA CGGCACCTAC TCGGTGGCCG ATGCCGCCTT CCTCAAGGCC 
CTGGCCGAGC CGGGCCAACA CCCGCTGGTC ATCACCGTGG TGGCCGGCAA CGACGCCGAC 
CTGCTGGAGG CGACGCTGAC CGGTGCCGGA GCAACAGCCG TGGCGGTGGC CGACCGCGGT 
CACGATGACC CGCACGGACA GGCGGCAACC CCGTGGCGCT CGGTGACCAT CGGGCTGGGA 
GCCGTGGCCG CCGTGGCCGC AATCGGGTGG TTCGCCATCC GTCGCCGCAG CGCCGGCAAG 
ACGTCGATGG GAGCCTCGCT GTGA
 
Protein sequence
MKPSLSFVRQ GLLALALAIS FPPLHAGPGA HGPNGEHLDS PAPATARSST SPRFETRTEA 
FEMVGRLEGG ELTLFINRFE TNEPVLDAQV ELESGALKVK APFLADHGTY SVADAAFLKA 
LAEPGQHPLV ITVVAGNDAD LLEATLTGAG ATAVAVADRG HDDPHGQAAT PWRSVTIGLG 
AVAAVAAIGW FAIRRRSAGK TSMGASL