| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0139 |
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| Symbol | |
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| ID | 6162940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 143174 |
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| End bp | 144367 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641662883 |
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| Product | PUA domain-containing protein |
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| Protein accession | YP_001789179 |
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| Protein GI | 171056830 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA TCCGTCTGCG CTCAGGCAAG GAGCGCTCGC TGCAGCGCAA GCACCCGTGG
GTGTTCGAGG GCAGCATCGC CTCGGGCAAG GCCGATGCGG GCGAGACCGT GCGGGTCGAA
GCCGCCGACG GCCGCTTCCT GGCCTGGGCC AGCTACAGCC CGAGCTCGAT GATCCGCGTG
CGCGCCTGGA GCTGGGACGA GGCCGAGCGC ATCGACGCCG CCTTCATCGC CCGGCGCGTG
CAGGCGGCGG TGGCGATGCG TGCGCGCCTG GGCCTGGCCA GCGACGGCGT GCGACTGATC
CACGGCGAGG CCGACGGCCT GCCCGGCCTG GTGGTCGACC GCTACGCGGA CATCCTGAGC
GCGCAGTTCC TGAGCGCCGG CGCCGAACGC TGGAAAGGCG TGATCGCCGA CGCGCTGCTG
GCCGCCACCG GCTGCACGCG GCTCTACGAA CGCTCGGACG CCAGCGTGCG CAAGCTCGAA
GGCCTGGAGC CGGCCACCGG CTGGCTGCGC GGAGGTTCTG AGAAGGAGGG CAGCACCGAG
GTCACCATCA CCGAACACGA CTGGCGCCTG ACACTCGACG TCGCCGAAGG CCACAAGACC
GGCTACTACC TCGATCAGCG CGACAACCGC GCGCTGTTCG CCCGGCTGGT GCGTCAGTTC
GGGATCCGGC GCGTGCTCAA CTGCTACAGC TACACCGGCG GCTTCTCGGT GGCGGCGCTG
GCCGGCGGCG CGAGCGAGGT GGTGAGCGTC GATTCGTCCG GCCCGGCGCT GGCACGCGCG
AGCGCCCACG TCACGCTCAA CGGCTTCGAC GCGGCGCGCC ACACGGCGCT CGATGCCGAC
GTCAACGCCA CCCTGCGCCA GCTGCTGGCC GAGGGCCGCA CGTTCGACGC CATCGTGCTC
GACCCGCCCA AGTTCGCGCC CACCCCGGCC AGCGCCGAAC GCGCTGCGCG GGCCTACAAG
GACATCAACC GGCTGGCGCT CAAGCTGCTG GTGCCGGGCG GGCTGCTGCT GACCTTCAGC
TGCTCGGGCG GCATCAGCGC CGACCTGTTC CACAAGATCG TGGCCGGCGC GGGCATGGAC
GCCGATGTCG ACGGCTACCT GCTGCAGCGG CTGGAGGCCG CCAGCGACCA CCCGACCACG
ATCTGCTTCC CCGAGGGCGA GTACCTCAAG GGGCTGGTGG TGCTCAGGCG CTGA
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| Protein sequence | MKTIRLRSGK ERSLQRKHPW VFEGSIASGK ADAGETVRVE AADGRFLAWA SYSPSSMIRV
RAWSWDEAER IDAAFIARRV QAAVAMRARL GLASDGVRLI HGEADGLPGL VVDRYADILS
AQFLSAGAER WKGVIADALL AATGCTRLYE RSDASVRKLE GLEPATGWLR GGSEKEGSTE
VTITEHDWRL TLDVAEGHKT GYYLDQRDNR ALFARLVRQF GIRRVLNCYS YTGGFSVAAL
AGGASEVVSV DSSGPALARA SAHVTLNGFD AARHTALDAD VNATLRQLLA EGRTFDAIVL
DPPKFAPTPA SAERAARAYK DINRLALKLL VPGGLLLTFS CSGGISADLF HKIVAGAGMD
ADVDGYLLQR LEAASDHPTT ICFPEGEYLK GLVVLRR
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