Gene Lcho_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0113 
Symbol 
ID6161882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp117947 
End bp118411 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content75% 
IMG OID641662857 
Producthypothetical protein 
Protein accessionYP_001789153 
Protein GI171056804 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0123409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCG AGCTGTGGAT GAGGAAAACG CATGAATCAG GCGACTTCTC GAAGGCCGCC 
GGCGGGTCGG TGTCGGCGCT GCAGACGCAC CAGTGGCGGG TCGCCCGCGC CGGCGTGCTG
CAGGTGCAGG ACGGCCCGCT CTGGCTGACC CGCGACGGCG ACCCCGACGA CCACGTGCTG
CAGCCCGGCG ATCACCTGCA CCTGCGGGCC GGCGAGCGCG TGACCGTCGG CGCCTGGCGG
CCGGCGCAGG CGACGGCCTG GCAGTGGCGA CCCGACCCGG TCGAATCGGT CGGTCAGCGC
TTCGGGCGGG CGCTGGTCTT CCTGGCGGCC GGCGCGCTCG ACCGGCTGGC GCGCGGCCTC
GAAGGCTGGG CCGCCCTGGC CCGCACGGCC GCCGCCAGCG CCAGTCGCGC CCACGGCTGC
ATCAGCGCGG GCGACTCCAT GGCGTCGTCG GGCGCGCTGA AGTAG
 
Protein sequence
MSIELWMRKT HESGDFSKAA GGSVSALQTH QWRVARAGVL QVQDGPLWLT RDGDPDDHVL 
QPGDHLHLRA GERVTVGAWR PAQATAWQWR PDPVESVGQR FGRALVFLAA GALDRLARGL
EGWAALARTA AASASRAHGC ISAGDSMASS GALK