Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0113 |
Symbol | |
ID | 6161882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 117947 |
End bp | 118411 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641662857 |
Product | hypothetical protein |
Protein accession | YP_001789153 |
Protein GI | 171056804 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0123409 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGATCG AGCTGTGGAT GAGGAAAACG CATGAATCAG GCGACTTCTC GAAGGCCGCC GGCGGGTCGG TGTCGGCGCT GCAGACGCAC CAGTGGCGGG TCGCCCGCGC CGGCGTGCTG CAGGTGCAGG ACGGCCCGCT CTGGCTGACC CGCGACGGCG ACCCCGACGA CCACGTGCTG CAGCCCGGCG ATCACCTGCA CCTGCGGGCC GGCGAGCGCG TGACCGTCGG CGCCTGGCGG CCGGCGCAGG CGACGGCCTG GCAGTGGCGA CCCGACCCGG TCGAATCGGT CGGTCAGCGC TTCGGGCGGG CGCTGGTCTT CCTGGCGGCC GGCGCGCTCG ACCGGCTGGC GCGCGGCCTC GAAGGCTGGG CCGCCCTGGC CCGCACGGCC GCCGCCAGCG CCAGTCGCGC CCACGGCTGC ATCAGCGCGG GCGACTCCAT GGCGTCGTCG GGCGCGCTGA AGTAG
|
Protein sequence | MSIELWMRKT HESGDFSKAA GGSVSALQTH QWRVARAGVL QVQDGPLWLT RDGDPDDHVL QPGDHLHLRA GERVTVGAWR PAQATAWQWR PDPVESVGQR FGRALVFLAA GALDRLARGL EGWAALARTA AASASRAHGC ISAGDSMASS GALK
|
| |