| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0112 |
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| Symbol | |
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| ID | 6162188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 116889 |
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| End bp | 117851 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641662856 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001789152 |
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| Protein GI | 171056803 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0089776 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACGC GAAACCGGCC GCTGTCGCTG CAGTCGCTGC GCGCGTTCGA GGCGGTGGCG
CGGCGGCTGA GTTTCCGGCT CGCCGGCGAG GAGCTGTTTC TCACCCAGTC GGCCATCAGC
CGGCAGATCA AGGGCCTGGA GGAGGAACTC GGCGCCGTGG TCTTCCAGCG CGACACCCGT
CAAGTCACGC TCACCGCCGC CGGTCTGACG CTGCAGCGCG CGGTGCAACC TCTGCTTGAA
CGGCTCGACG GCGCGGTGCG CCAGATCCGC AGCGCCGGCG CGCGGCCGCG GGTGGCGATC
ACCACCTTCG CGTCGTTCGC CACGCTGTGG CTGATCCCGC GGCTGGAGGC CTTCCAGCGC
CGCCATCCGG CGCTCGACAT CCGCATCGCC GCGCACGACA CGCTGCACGA CATGGACGAC
CCGGACATCG ACATGGCGCT GCGCTATTGC CACCCCGACG ACGCGCCGCC CGGCGCCTTG
CTGCTGTTCG GCGAGGTGCT GGCGCCGGTC GTCAGCCCCT GGTATCTGGA GCGCGCCCGG
CGCGGCGAGA TCGCCGCACT CGATCAACCG GTCGACCTGG CGGGCCACAC GCTGCTGGAG
GTGGAGGGGC TTTACCTGGG CAGCAGTCCG TATCGATCCT GGGAACACTG GCTCGCCGCG
CGCGGCCTGC AGGCCCTGCA GCCGCGCAGC TGGGTGCATC TCAATTACGA CCACCAGCGC
GTGCAGGCCG CGCAGGCCAG CCAGGGCGTG GTGCTGGCGC GCCTGCCGCT GGTGGCCGAC
ATGCTGGCGC GCGGCGAGCT GGTCGAACCG TTCGGCCCCG CCGGCCGTGA CGCCGTGCCC
TACGGCTACT GGCTGATCCT CGCCAGCGGC GCCGTGCAGC GGCCCGAGGT GCAGCAGCTG
CGCGACTGGG TCGCCGAGCA GGCCGCGCCG GTGCGGCAGG CCTTGGGCGA GCACGCCCCG
TGA
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| Protein sequence | MSTRNRPLSL QSLRAFEAVA RRLSFRLAGE ELFLTQSAIS RQIKGLEEEL GAVVFQRDTR
QVTLTAAGLT LQRAVQPLLE RLDGAVRQIR SAGARPRVAI TTFASFATLW LIPRLEAFQR
RHPALDIRIA AHDTLHDMDD PDIDMALRYC HPDDAPPGAL LLFGEVLAPV VSPWYLERAR
RGEIAALDQP VDLAGHTLLE VEGLYLGSSP YRSWEHWLAA RGLQALQPRS WVHLNYDHQR
VQAAQASQGV VLARLPLVAD MLARGELVEP FGPAGRDAVP YGYWLILASG AVQRPEVQQL
RDWVAEQAAP VRQALGEHAP
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