Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0070 |
Symbol | |
ID | 6160177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 74058 |
End bp | 74654 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641662814 |
Product | hypothetical protein |
Protein accession | YP_001789110 |
Protein GI | 171056761 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGAAG GAAACCTGCG GCGGGCGCTG ATCGGCGCCT CGCTGTTCGC CGGTGCCGGC CTGGTGTCGG CCATCGCCAC GCCCGCGCGC GCCGAAGACC CGCGCGAACG CCTGCGCCGC AAGCGCCTGC ACAACCTGCC CCTGCTCACC CAGGACGGCC GGACGGTGCG CTTCTACGAC GACGTGGTGA AGGACCGCAA GGTCGTCATC AGCGTGATGT ACACCGGCTG CAGCAACATC TGCACGCCCG CCACCCGCAA CCTGATGGAG GCGCGCGAAC GCCTCGGCGA CTTCGGCCGC GACATCCATT TCGTCTCGAT CTCGCTGACC CCGCTGACCG ACACGCCCGC CGAACTGCGC GCCTACAAGA AGGCCCACGG CATCGGCGCC GACTGGACCT TCCTGACCGG CAAGCCGGCG CACGTCGAAC AGGTCACGCG CGGCCTCGGC CTGCTCAGCG AAGACCCGGC CGACGACCTG CTGAGCCACT CGGGCAGCGC CGTCATCGCC GACGAGAAGC TCCTGAAATG GGGCCACGGC TCGACCCTGA CGGGCGGCCG CGCGCTGGCG CGCATGATCC GCTTCGAGCT GGTCTGA
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Protein sequence | MLEGNLRRAL IGASLFAGAG LVSAIATPAR AEDPRERLRR KRLHNLPLLT QDGRTVRFYD DVVKDRKVVI SVMYTGCSNI CTPATRNLME ARERLGDFGR DIHFVSISLT PLTDTPAELR AYKKAHGIGA DWTFLTGKPA HVEQVTRGLG LLSEDPADDL LSHSGSAVIA DEKLLKWGHG STLTGGRALA RMIRFELV
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