| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0038 |
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| Symbol | |
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| ID | 6160132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 41903 |
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| End bp | 42886 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641662783 |
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| Product | hypothetical protein |
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| Protein accession | YP_001789079 |
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| Protein GI | 171056730 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.425396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACA TCCAGACCCG CCGCCAGACC CTGCGCCAGC TCGGTGCCCT GACCCTGGCC
GGCGCCGCCG GCAGCGCCTG GGCGCAGGCC GCAGGCGACA AGACCGTGCG CATCGTGCTG
CCCAACGCCG TCTCGTCGGG CGTCGACACC ATCACCCGCA CGGCGCAGAA CGCGCTGTCC
AAGGCGCTTG GCCACCCGGT GGTGGTCGAG AACCAGCCCG GCGCGGGCGG CGTGCTGGGC
GTGCAGACGG TGGTGCGCGC CGCGCCCGAC GGCCTCACGC TCGGCGTGGT GTCGAACAAC
GTGGTGATCT TCCCGAGCGT GCTCAAGTCG CTGCCCTTCG ACCTGCACAC CGACGTCACG
CCGATCGCGA TCTGCGGCTA CACGCCGGTG GTGCTGGTCG TGAACCCGAA GGTGCCGGCC
ACCAACGCGA AGGAGTTCAC CGCCTTCCTC AAGAGCAAGA ACGGCGAGGC CAATTTCGCC
TCGGGTGGCA ACGGCACCAT CCTGCACCTG GCGGCCGAGA TGTTCCTCGA CGAAGCCGGC
GTCAAGGCCC GCCACATCCC CTACAAGGGC GTCGGCCCGA TGCTGACCGA CCTGATCGGC
GGCCAGGTCG AGTTCGCCAC CGCCGCGTTG CCCAGCGTGC AGCAGCACCT CAAGAGCGGC
GCGCTGCGTG CCATCGGCAT CGCCACCTCG CAGCGCGTGC CCGCCGCGCC CGACCTGCCG
ACCTTCGTCG AGCAGGGCCT GCCCGGCTAC GTGGTCGAGG CCTGGTTCGG TGTGATCGGC
CCCAAGGGAC TGCCGGCGGC GGACGTCAAG CGCATCAACG CCGCGGTGGT CACGGCCTTT
GCCGATCCGG GCGTGATGGA GGCGATGGCC AAGCAGGGCA ACGTCATCAA CGTCAGCACG
CCCGAGCGCG CGCAAACGTT CTTCAAGGAC GAGATGCTGA AGTACGCCAA GCTGGTCAAG
AAGGCCGGCA TCGAGGCCCA GTGA
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| Protein sequence | MKNIQTRRQT LRQLGALTLA GAAGSAWAQA AGDKTVRIVL PNAVSSGVDT ITRTAQNALS
KALGHPVVVE NQPGAGGVLG VQTVVRAAPD GLTLGVVSNN VVIFPSVLKS LPFDLHTDVT
PIAICGYTPV VLVVNPKVPA TNAKEFTAFL KSKNGEANFA SGGNGTILHL AAEMFLDEAG
VKARHIPYKG VGPMLTDLIG GQVEFATAAL PSVQQHLKSG ALRAIGIATS QRVPAAPDLP
TFVEQGLPGY VVEAWFGVIG PKGLPAADVK RINAAVVTAF ADPGVMEAMA KQGNVINVST
PERAQTFFKD EMLKYAKLVK KAGIEAQ
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