| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5931 |
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| Symbol | |
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| ID | 6128735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 3125645 |
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| End bp | 3127699 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641653015 |
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| Product | HrcV family type III secretion protein |
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| Protein accession | YP_001779542 |
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| Protein GI | 170738282 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4789] Type III secretory pathway, component EscV |
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| TIGRFAM ID | [TIGR01399] type III secretion protein, HrcV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.878766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0843176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAGA ATCTGAAGTT GCCCGCGGGC GGCGAGGTCG GCATCGCGGC CCTCGTCACG
GCCATCGTTT CACTGATGAT CCTGCCGCTG CCGCCGGTCG TGATCGACAT GCTGCTGTCG
GTCAACATCT GCATCAGCGT CGTGCTGCTG ATGGTCACGC TGTACGTGCC GTCGATCACG
CAGCTGTCGG CGTTTCCGTC GGTGCTGCTG TTCACGACGC TCTACCGGTT GTCGCTCAAC
ATCGCGTCGA CCAAGTCGAT CCTGCTGCAC GCCGACGCGG GGCACATCAT CGAGAGCTTC
GGTGAGCTCG TGGTCGGCGG CAACCTCGTC GTGGGCCTCG TCGTGTTCCT GATCATCACG
ACCGTTCAGT TCATCGTGAT CGCGAAGGGT TCGGAACGGG TGGCCGAAGT CGGTGCGCGG
TTCACGCTCG ACGCGTTGCC CGGCAAGCAG ATGAGCATCG ACGCGGACTT GCGCGCGAAC
CTGCTGACGC CCGACGAGGC GCGCCGCAAG CGCGCGCGCC TCGCGGTCGA AAGCCAGCTC
TACGGCGGCA TGGACGGCGC GATGAAGTTC GTCAAGGGCG ACGCGATCGC CGGACTCATC
ATCACGCTCG TCAACATGAC GGCCGGCATC GCGGTCGGCG TGGCCTATCA CGACATGACG
GCCGGCGACG CGGCGAACCG CTTTTCGATC CTGTCGATCG GCGATGCGAT GGTGTCGCAG
ATCCCGTCGC TGCTGATCGC GGTATCCGCG GGCGTGATGA TCACGCGGGT ATCCGACGAG
TCGGCCAAGC AAGGCAGCTC GCTCGGCGAG GACATGTTGC GCCAGCTCGG CGGCAACGCG
CGCGCGATGC TGTTCGCGGC GGTGCTGCTC CTCGGCTTCG CGATGGTGCC CGGCTTTCCA
TGGGAACTGT TCCTGCTGCT GTCCGCGCTG CTCGGGTTCG CCGGTTACCG GCTCGCGCGG
CGCGGCGACG GCACGTCGTC GGCCGCGCCG GGCAAGACGG TCGCGGCGCT GCAGCGCGCG
GGCTCGAAAG GCGACGCGCC GACGATCCTC CGGCACGCGC CGCAGTTCAC CAGCGCGCTC
GGCGTGCGGC TCGCTCCCGA TCTCGCCGAC CGCCTGTCGG CCACCGCGCT GAACGATGCG
TTCGAGACGC AGCGCATGCT GCTCCAGGAG CAGATCGGCC TGCCGTTCCC GGGCATCACG
ATGTGGACCG CGTCCGACCT GGCGGCTGGC ACGTTCGAGA TTCTCGTGCT GGACGTCCCG
TCGCTGACCG TGACGATTCC GCCCGGCAAG GTCATGGTGC CCGGCGCGGC GACCGACCCG
GCGCTGGCCG CGCAATGCGA GAAGGCCGGC GCGGCGGCCG GCCAGGCGGA CAGCTACTGG
GCGCCGGAAC GCCAGCCGCC CGGCGGCGCG ACGGTGTGGC GCGCGGAACA GGTGATCGCC
AACGACACGA TCGCGCTGCT GCGCGCCCGC GCGAAGCTGT TCGTCGGCAT CCAGGAAACC
CAGTGGGTGC TGGAGCAGCT CGGCGCCGAA TTCCCCGGGC TCGTCGCCGA GGTGCAGAAG
GCGTTGCCGC TGCAGCGGAT CGCCGACGTG CTGCGGCGCC TGCTGGAAGA GAACGTTCCG
ATCCGCAACG CGCGCAGCAT CATGGAGAGC CTCGTGAACT GGGGGCCGAA GGAGAAGGAC
ATGCTGCTGC TGACGGAATA CGTGCGCGGC GATCTCTCCC GGTATATCGC ATACAGCGCG
ACGGGCGGCG CCGCGTCGTT GCAGGCCGTC CTGTTCACGA GCGACCTGGA ACAGCACATT
CGCCAGTCGA TCAAGCAGAC GCCGACCGGC AACTATCTCG CGCTCTCGCC CGACGAAGTC
CGCACACTCG CGGAGCGGAT CGGCGCTTAC GTGGGCGACG TGCCGCACGA CGAAGTCGCG
CTCGTCACGT CGATGGACAT CCGCCGCTAC GTGCGGCGCA TGGTCGAGGC GCACCTGCCG
TGGCTGCGCG TGTACTCGTA CCAGGAGCTC GGCGATTACG TCGAACTGCG CCCGCTCGGT
CGCGTCACGA CATGA
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| Protein sequence | MFKNLKLPAG GEVGIAALVT AIVSLMILPL PPVVIDMLLS VNICISVVLL MVTLYVPSIT
QLSAFPSVLL FTTLYRLSLN IASTKSILLH ADAGHIIESF GELVVGGNLV VGLVVFLIIT
TVQFIVIAKG SERVAEVGAR FTLDALPGKQ MSIDADLRAN LLTPDEARRK RARLAVESQL
YGGMDGAMKF VKGDAIAGLI ITLVNMTAGI AVGVAYHDMT AGDAANRFSI LSIGDAMVSQ
IPSLLIAVSA GVMITRVSDE SAKQGSSLGE DMLRQLGGNA RAMLFAAVLL LGFAMVPGFP
WELFLLLSAL LGFAGYRLAR RGDGTSSAAP GKTVAALQRA GSKGDAPTIL RHAPQFTSAL
GVRLAPDLAD RLSATALNDA FETQRMLLQE QIGLPFPGIT MWTASDLAAG TFEILVLDVP
SLTVTIPPGK VMVPGAATDP ALAAQCEKAG AAAGQADSYW APERQPPGGA TVWRAEQVIA
NDTIALLRAR AKLFVGIQET QWVLEQLGAE FPGLVAEVQK ALPLQRIADV LRRLLEENVP
IRNARSIMES LVNWGPKEKD MLLLTEYVRG DLSRYIAYSA TGGAASLQAV LFTSDLEQHI
RQSIKQTPTG NYLALSPDEV RTLAERIGAY VGDVPHDEVA LVTSMDIRRY VRRMVEAHLP
WLRVYSYQEL GDYVELRPLG RVTT
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