Gene Bcenmc03_5880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5880 
Symbol 
ID6128684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp3067412 
End bp3068482 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content63% 
IMG OID641652964 
Producthypothetical protein 
Protein accessionYP_001779491 
Protein GI170738231 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.572225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0647392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACTT CCGGCGACGG CCTGACCAGC CCGGCGCGGC TCCTGCGACT CGCTTCATGG 
GTGATTGCGA TCATCTTCGC CGTCTTTCTG AACATGCTCG GCAGTCTCGT GATTCGCGAC
ATGGCGTTCG CCCCGAGCGG TGGCCCGCCG GTCATCGAGC AATTCGCCGA CGCTCCGTTA
AAAGCGCGGC TGGATGCGGC GCGGCGTCAG TTGCAGGCGC AGCGCGACGC GCTTGCCGAG
AAGGTCGACA CGATGGAAGT GGCGCGCGGC CGCGCCGCGA AGGAGTACGC GGCCGAGAAG
GAAAGTTTCC GCAACTGGCT GGCCACCCGC GCGGTGACGG GCGACGGTGC GCGGGACCCG
GACATCGTGG CGAGAACGCG CAAGCTGGAT ACGCTCCAGG CCGTGGTCGT CAACTGGCAG
CATCAGATCG ATGCGATCGG CGATCAGCAA CGGGCGCTGG CATCGCAGCA GACGCAAGTC
GACACGCAAA TCGCCGAAGC GGACGCAGCA GCCGAACGGC GCTTCGACGC CGCGACCCGG
CACTACGAGA TGCAGGTGTT CGGGCTGCGG CTTGCGTTGA CGTTACCGAT TCTGCTGGTT
GCGACCTGGC TGTTCATCCG CTACCGCAAG GCGCGCTACT GGCCGTTCGT ATACGGTTTC
GGCCTGTTTG CGCTGAGCGC GTTTTTCATT GAACTGGTGC CGTACTTGCC GAATTTCGGC
GGCTATGTCC GGGTCCTGGT CGGCATCGTG CTCACGGTGT TCGCCGGTCT GTACATGATG
AAGGCGTTTC AGCGCTATGC CGAACGCAAA CGGCTCGAGT TGCAGCAGGA TCAGGGCGAG
CGCGCGCGCA CGATCGGATA TGAAAAAGCC GTCCGGTCGC TCGAAAAAAA GCGCTGCCCG
TCATGCGACA AACAATGGAG TCTCGGCGGG AACGACTCCA CGTTTTGCGT CCATTGCGGG
TTGAGGCTTT TCAATGTTTG CGAATGCGGT GGCCGGAATT TCTTCTTCTT CCCGCATTGC
CATCAATGCG GTGTTGCGCA GGGGAATGAG TCGCCGGTGT CGTCCGACTG A
 
Protein sequence
MMTSGDGLTS PARLLRLASW VIAIIFAVFL NMLGSLVIRD MAFAPSGGPP VIEQFADAPL 
KARLDAARRQ LQAQRDALAE KVDTMEVARG RAAKEYAAEK ESFRNWLATR AVTGDGARDP
DIVARTRKLD TLQAVVVNWQ HQIDAIGDQQ RALASQQTQV DTQIAEADAA AERRFDAATR
HYEMQVFGLR LALTLPILLV ATWLFIRYRK ARYWPFVYGF GLFALSAFFI ELVPYLPNFG
GYVRVLVGIV LTVFAGLYMM KAFQRYAERK RLELQQDQGE RARTIGYEKA VRSLEKKRCP
SCDKQWSLGG NDSTFCVHCG LRLFNVCECG GRNFFFFPHC HQCGVAQGNE SPVSSD