Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_5866 |
Symbol | |
ID | 6128670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 3048925 |
End bp | 3051009 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641652950 |
Product | TonB-dependent receptor |
Protein accession | YP_001779477 |
Protein GI | 170738217 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.754568 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGACC TCCCTCGCTT ACCGCTTCGC CCGCTCTCGT CCCTGTCGCT GATGCTGTGC GCCGCCGTCG CCCACGCGCA GACCGATGCG CCCGCCGCGT CCGGCACGCC CGCCGCCGCA CCCGCACCGC TCGCGCCGAT CTTCGTGACC GCGAACCCGC TCGGCGACAC TGAACTGATC GCACCGACCG TCCAGCTTTC CGGCGATGCG CTGACGCGCC GCCAGGCCGA TTCGCTCGGC GAAACGCTCA ACGGGCTGCC CGGCGTGTCG ACCACCACCT ACGGGCCGAT GGTCGGCCGC CCGATCATTC GCGGGATGGA CGGCGACCGG ATCCGGCTCC TGCAGAACGG CGTCGCGGCG TATGACGCGT CGTCGCTGTC GTACGATCAC GCGGTGCCGC AGGACCCGCT GTCGATCGAG CGCGTCGAGA TCGTGCGCGG CCCGGCCGCG CTGCTGTACG GCGGCAACGC GGTGGGCGGC GTGGTCAACA CGATCGACAA CCGGATTCCG CGCGAAGCGA TCGAAGGCGT GACGGGTGCG CTCGACGCCC GCTACGGCGG CGCGAATTCC GTGCGCGCCG GCGCCGCGCA GGTCGAAGGC GGCAACGGCC GCTTCGCGTT CCACGTCGAC GCATTCGATC GCGAAACCAG CAAGCTGCGG ATTCCCGGCT ATGCGCGCAG CAGCCAGCAG CGCGCGATCG ACGGCCCCGA CACGCCGCAA CCGGAAGGCA ACGTGCCGAA CAGCGACGGG CGCGTGCACG GCGGTGCGGT CGGCGCGTCG TACACGTGGG CGGACGGTTT CGCGGGCCTG TCGTACAGCG GCTACGAATC GAACTACGGC TCCGTCGCGG AAAGCGACGT GCGGCTGCGG ATGCGCCAGG AACGCCTCGC GTTCGCGTCC GAGGTGCGCA ACCTGAGCGG GCCGTTCACG AAGCTGAAAT TCGATTTCGC GTACACCGAC TACCGCCACA AGGAAGTGGA CAACGGCGAG ACGGCGACCA CCTTCCGCAA TCGCGGTTAC GAGGCGCGCA TCGAGGCACG CCATCGAAAG ATCGGGCCGT TCGAAGGCGC GATCGGCGTG CAGTTCGGTC AGAACACGTT CTCGGCGCTC GGCGACGAAA TGCTCGTGCC GTCCACCCGC ACCAACAGCG TCGCGCTGTT CGGCCTCGAG GAATGGCAGG TCGTCCCGGC GCTGAAGCTG AGCCTCGGCG GCCGCTTCGA GCACGTGAAG GTCGATCCCG ATCCGGCGGG CGTCGAGAAA TTCGCGGGCG CGCAGCCGCG CGACTTCAAT GCGGGCAGCC TGTCGGCCGG CGCGCTGTTC TCGCTGACGC CGGTATGGTC GATCGCAGCG AACGTCGCCT ACACCGAACG CGCGCCGACC TTCTACGAGC TGTATTCGAA CGGCCCGCAC GATGCGACCG GCCAGTTCCT GATCGGCAAC CCGAACGCGT CGAAGGAAAA GGCCGTGTCG ACCGACCTGT CGCTGCGCTA TGCGAGCGGG CCGAACCGCG GCAGCGTCGG CGTGTTCTAC AACCGCTTCT CGAATTACCT GACCGAGTAC AACACCGGCC GCGTGGTGGA CGACGACGGC GAGCCCGTCG CGCCCGGCAC CGACGGCTCG CTCAACGAGG CGATCTACCG CGGCGTGCGC GCCGAGTTCT ACGGCGTCGA GCTGGACGGC AAGTGGCGTG CGTTCTCGCG GCGCGGTCAC ACCGTCGATC TCGAACTGAC GGCCGACTAC ACGCGCGCGC GTAACGTCGA CACGGGCCAG CCGCTGCCGC GCATCGCGCC GCTGCGCGCG ACGCTCGCGG CCGACTACGG TTACGGCCCG TTCGGTGCGC GCGCACAGGT CACGCACGCG TGGTCGCAGC ATCGCGTGCC CGACGACGAC TTCTCGACGG ACGGCTATAC GTCGCTCGGC GTGATGCTGA CGTACAAGTT CCGCGTCGGC CCGACGCACT GGCTCGCCTA CCTGCGCGGC GACAACCTGA CGAACCAGGA GATTCGCTAC TCGACGTCGG TCGTGCGCGG CTTCGCACCG CAAGGCGGCC GCAGCGTGAT GGCCGGATTG CGCACCACGT TCTGA
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Protein sequence | MRDLPRLPLR PLSSLSLMLC AAVAHAQTDA PAASGTPAAA PAPLAPIFVT ANPLGDTELI APTVQLSGDA LTRRQADSLG ETLNGLPGVS TTTYGPMVGR PIIRGMDGDR IRLLQNGVAA YDASSLSYDH AVPQDPLSIE RVEIVRGPAA LLYGGNAVGG VVNTIDNRIP REAIEGVTGA LDARYGGANS VRAGAAQVEG GNGRFAFHVD AFDRETSKLR IPGYARSSQQ RAIDGPDTPQ PEGNVPNSDG RVHGGAVGAS YTWADGFAGL SYSGYESNYG SVAESDVRLR MRQERLAFAS EVRNLSGPFT KLKFDFAYTD YRHKEVDNGE TATTFRNRGY EARIEARHRK IGPFEGAIGV QFGQNTFSAL GDEMLVPSTR TNSVALFGLE EWQVVPALKL SLGGRFEHVK VDPDPAGVEK FAGAQPRDFN AGSLSAGALF SLTPVWSIAA NVAYTERAPT FYELYSNGPH DATGQFLIGN PNASKEKAVS TDLSLRYASG PNRGSVGVFY NRFSNYLTEY NTGRVVDDDG EPVAPGTDGS LNEAIYRGVR AEFYGVELDG KWRAFSRRGH TVDLELTADY TRARNVDTGQ PLPRIAPLRA TLAADYGYGP FGARAQVTHA WSQHRVPDDD FSTDGYTSLG VMLTYKFRVG PTHWLAYLRG DNLTNQEIRY STSVVRGFAP QGGRSVMAGL RTTF
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