| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5842 |
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| Symbol | |
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| ID | 6128646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 3020861 |
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| End bp | 3022231 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641652926 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001779453 |
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| Protein GI | 170738193 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.227678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCATA CCGGAGAACT CGCCAACCAC GCGCTCAAAC GCCGAGGCGT GACGCTGCTC
ACGCTGTGCA TCGCCGTACT CGTGGCTCAG GTCGACACCG CCGTCGTCAA CCTGGCGACG
CGCGCGATCG GCGCCTATTT CCATGCCGGT GTCGGCGCAT TGCAATGGGT CGTCGACAGC
TACAACCTCA CGTATGCGGT GCTGCTGCTG ACCGGCGGGC TGCTCGCCGA CCTGTACGGC
CGCCGTCGCG TCTTCATGGC CGGCACGGCG GTCTTCACGA TCGCGTCGCT GCTGTGCGCG
CTCGCGCCGT CGGTGTCGGT GCTGATCGCC GCACGCGCAC TGGCCGGCGT CGGCGCGGCC
CTGTTGCTGC CGGCGTCGCT TGCGGTCGTG CGCGTCGTGT GGCGTGATCC GGTCGAACGC
GGCCGCGCGC TCGGCATCTG GGCTGCGTGC AACGGCGTCG CGATGGCAAT CGGCCCGACG
CTCGGCGGCG TGCTGATCCG GCACTTCGGC TGGCGCAGCA TCTTTTTTGT CGTCGTGCCA
CTGAGCATCG CAGCGATGCT GCTCGCGATC CCGGCCGTGC CCGAATCGTC CGATCCGCAC
GGCCGGCATT TCGACGGCGC GGCGCAAGTC ACGGGCGCAC TCGCGCTCGG CGCGCTCGCG
TATGCGGCGA TCGTGTTCCG TGAGGCGCCG GTCGCCTGCG CGATCGCCGG CTGCATCGCA
GTCGCGTCAT TCGCCGGGTT CGTGGCGATC GAGCGCCGCC ACGGCGAATC CGCGCTGGTA
CCGCTCGACA TTTTCCGGAT CAGCGCGTTT CGCGGCGCGA TCGTCGCGAC CACCGGCATG
ACGTTCGGGA TGTACGGTGT GCTGTTCCTG CTGCCGCTGA CGTGGCAGAG CATCGGCCGG
CTCGATTCGA CCGGCGCGGG CCTCGCATTG CTGCCGATGG CGCTCGTGTT CGTCGTCGTG
TCGCCGTGCT CGGGACCGTT GTCGGAACGT ATCGGCACGC GCGCGACGAC GGCCGGCGGC
GTCGCGGTGA TCGCGAGCGG GCTCGCCGTG ATCAGCGTGT CGGCCAGCTC GTCGAGCCTG
CTCGGCGCCG AAATCGGGCT CGCATTGACG GGGCTCGGGA TGGGAATCGC GACGGGGCCG
CTGATGACGG TCGCGGTCGG CGCGGTCGAC GCGGCGCGCT CGGGCACCGC GAGCGCGCTC
GTCAACGTCG CGCGGATGGC CGGCGCGACG CTCGGGATCG CGGTGCTCGG CACGGCGTTC
GCCGCCGCGC ACGGCGGCGC GGCCGGGCTG CGCGTGGCGA TGTTCGCCGG CGCGGCGGTT
CAATTGACGG GCGCGGCGGT ATCGGCAGTC AGCGTGCAGC GGGCGGCATG A
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| Protein sequence | MAHTGELANH ALKRRGVTLL TLCIAVLVAQ VDTAVVNLAT RAIGAYFHAG VGALQWVVDS
YNLTYAVLLL TGGLLADLYG RRRVFMAGTA VFTIASLLCA LAPSVSVLIA ARALAGVGAA
LLLPASLAVV RVVWRDPVER GRALGIWAAC NGVAMAIGPT LGGVLIRHFG WRSIFFVVVP
LSIAAMLLAI PAVPESSDPH GRHFDGAAQV TGALALGALA YAAIVFREAP VACAIAGCIA
VASFAGFVAI ERRHGESALV PLDIFRISAF RGAIVATTGM TFGMYGVLFL LPLTWQSIGR
LDSTGAGLAL LPMALVFVVV SPCSGPLSER IGTRATTAGG VAVIASGLAV ISVSASSSSL
LGAEIGLALT GLGMGIATGP LMTVAVGAVD AARSGTASAL VNVARMAGAT LGIAVLGTAF
AAAHGGAAGL RVAMFAGAAV QLTGAAVSAV SVQRAA
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