| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5818 |
|---|
| Symbol | |
|---|
| ID | 6128622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 2998214 |
|---|
| End bp | 2999110 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641652902 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001779429 |
|---|
| Protein GI | 170738169 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTTG CCCAGTTGCA GGCCCTGGCC GCCGTGGTCG AACTCGGCTC GCTGACGGCC
GCGGCAGACC GGCTCAGCCG CAGTCAATCC GCGATCAGCC ATGCGCTGAC GGAGCTGGAA
GACATCACGC AGGTCAAGCT GCTCTGGCGC GACCGGCAGC CGGTCGTCCT GACGGCGGCC
GGCGAACGCC TGTGGCCGTA TGTCCAGAGC GTGGTGCGGG AAGCGCAGAT GCTGCGCCAG
CAGTTCAGCC TGTCGCGCGG CAAGCTTGAA GGGAGGCTGG TGGTCGCGTC GCTGCCGAGC
GTGTCACTGG CATTCGTCGT TTCCGCGCTC GAGGCGTTGA AGGAGATGCA CCAAGGCGTG
TCGGCGGTGC TGCTCGAAGG CACGGACAGC GAAGTCGAAG GGTGGATCGA CGACGGGACG
GCCGACGTCG GCGTGGTGGC CGGCACGAAG ACGTTCGCGC ACAACCTGCC GCTCCTCGAC
GAGGATTTTG TCGCGGTAGC GGCCGACGAC ATGTTCGCCG GTCGCAAGAG CGTGTCGGCC
AGGCAGTTGG CCGCGGCGCC GTTCATCTTC TCGAAGGTGG GGTGCGGGCC GGTGATCACG
GATTACTTCG CGCGCGGCGG CGTGCCGCTT CGCGCGGCGT TCAACGTCGT CGAGATGCGC
ACCATCCTGT CGATGGCGGA GGCGGGCATG GGCGTGTCGA TCGTGCCGCG CATCACGCTT
ACGTACACGC CGTTCGGCGG CCGTGTGCTG GAACTGTCGC CGCGGCTGCA TCGCTCCGTG
CGACTGGCGT GGAATACCGC GGGCAATGCG GTCACCGACG AGTTCGTGCG GCTCGTCGAT
GCGCAACGTG CGAAGGCGGG AAAGACGACC CGGACGCGCG CGAAAAAGGG CGGGTAG
|
|---|
| Protein sequence | MTLAQLQALA AVVELGSLTA AADRLSRSQS AISHALTELE DITQVKLLWR DRQPVVLTAA
GERLWPYVQS VVREAQMLRQ QFSLSRGKLE GRLVVASLPS VSLAFVVSAL EALKEMHQGV
SAVLLEGTDS EVEGWIDDGT ADVGVVAGTK TFAHNLPLLD EDFVAVAADD MFAGRKSVSA
RQLAAAPFIF SKVGCGPVIT DYFARGGVPL RAAFNVVEMR TILSMAEAGM GVSIVPRITL
TYTPFGGRVL ELSPRLHRSV RLAWNTAGNA VTDEFVRLVD AQRAKAGKTT RTRAKKGG
|
|---|
| |