| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5427 |
|---|
| Symbol | |
|---|
| ID | 6128237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 2552188 |
|---|
| End bp | 2553021 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641652517 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001779044 |
|---|
| Protein GI | 170737784 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.370674 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.235662 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATATG CTGACGGCGC ACCACGCGTC GAGTGGTTCT CACAAGCCGA TATAGCGGCC
GCCGCCGCTT ATTCGAACGA ATATCACGCA ATCGAGCGTG ACGTTTTTAC CGGTATTCAA
ATAGCGCCCG GTAAAACCGA CCTTGCGTCA TTCGATTTCT CGCAATGCCA TGCGCGATTG
CGGCAAATCG GATTCAGTAC GCTGGGTTAC GGCGCCTACG AAATGATCGG GCGGCGCATT
CTGCGTGCGC ATCTGCTGCG CGACCTCGCG CCGGCGACGT TCATGCAGCC GTTCATCGAA
GGAATGCTGT ACGACAGCGA CCCGCGTTTC GCGCAGGTGC GGCAGAGCGG CTTTCCGGTC
GCATGGCGGC TCGACGAGAT CGAGGCGGCC GCACAGGGCA GCGGCGATCG CAAGGTGCTG
GCGCTGGCCG GCCACTTGCG TGCGCACGCA ATGAACAGCG GCGTGATTTT CAGCCTGTCG
GCGCCGCGGC TCGACCTGCG CGTCGCGGTG AACCTGACGT CGGAAACGCA CGGCACCGAA
TGGATCGACG ATCGCGTGAT CGGCGGCGCG CTGTCGGTCA GTCTTGCCGT GCATCGCGTC
GCGCTGCCGT TCCTCGAGGC GCGGGTCGCG CGCATGCGCG GCTTCGCGCT CGCGGACGAG
CAGCAGGAAG TGCTCGACCG GCTCGTGCAC GGGCTGTCCG ACCAGGAGAT CGCGAGCGCG
CTGCGCACGT CGCTGCACAA GGTCGGGCAC CACATCCGCT CGCTCGAAAA ACTCTTCAAC
GTACAGAACC GCGCGCAGCT CGCGTACCTC GCCGCGCGGC GGCTGCCGTC CTGA
|
|---|
| Protein sequence | MTYADGAPRV EWFSQADIAA AAAYSNEYHA IERDVFTGIQ IAPGKTDLAS FDFSQCHARL
RQIGFSTLGY GAYEMIGRRI LRAHLLRDLA PATFMQPFIE GMLYDSDPRF AQVRQSGFPV
AWRLDEIEAA AQGSGDRKVL ALAGHLRAHA MNSGVIFSLS APRLDLRVAV NLTSETHGTE
WIDDRVIGGA LSVSLAVHRV ALPFLEARVA RMRGFALADE QQEVLDRLVH GLSDQEIASA
LRTSLHKVGH HIRSLEKLFN VQNRAQLAYL AARRLPS
|
|---|
| |