| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5379 |
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| Symbol | |
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| ID | 6128189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 2503684 |
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| End bp | 2505063 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641652469 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001778996 |
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| Protein GI | 170737736 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0243202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.122741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGACA ACACGTTGAG GCAGAGCCTC AAGCAACGGC ACATCACGAT GATCGCGCTC
GGCGGCGTGA TCGGCGCGGG CCTGTTCGTC GGCTCCGGCG CGATCATCGC AACGGCCGGC
CCCGCGGCAA TCCTGTCGTA CCTGATCGGC GGCGTGATCG TCACGCTGGT CATGTTCATG
CTCGGCGAAA TGGCGTCCCG CAATCCCGAC AGCGGCTCGT TCTCCACGTA TGCGAGCAGC
TACCTCGGCG AATGGGCCGG CTTCGCGGTC GGCTGGCTGT ACTGGTTCAA GTCGATGATG
ACGATCACCG TCGAAGCGAT CCTGCTCGGC GCGATCCTCC ACGATTTCCT GCCGTGGCTG
CCGATCTGGG GCGGCGCGCT GTTCATGCTG GTCACGCTGA TCGCGAGCAA CGCGTACTCG
GTGCGCTCGT TCGGCGAAGC CGAATACTGG CTGTCGTTCG CGAAGGTCGC GACGATCATC
GTGTTCATGG CGCTCGGCGC GTCGATCCTG CTCGGCTTCC AGCCGCGCAT TCCCGCACCG
GGGCTCGTGA ACCTGACCGA TCACGGCGGT TTCATGCCGA ACGGCATCTC GCCCGTGCTC
GCCGGCGTGA TGGTCGTGAT CTTCTCGCTC GGCGGCAGCG AGATCGCGGC GGTGGCCGCG
GGCGAATCGG AAAACCCGAG CAGGAACGTG ATCCGCGCGA TCAAGAGCGT GATCGTGCGC
GTGATGGTGT TCTACGTCGG CTCGGTGTCG ATCCTGATCC TGTGCATGCC GTGGACCGAC
AAGGCCAACC TGAAATCGCC GTACGTGTCG CTGTTCGGCA TGGCGGGCTT CACGGGCGCC
GCCGTCGCGA TGAAGATCGT GCTGTTCGTG TCGTTCATGT CGGTGATGAA CTCGTTCCTG
TTCTCGAACT CGCGCATGCT GTTCTCGCTG AGCCAGCGCG GCCACGCGCC GGCGATGTTC
GGCCGCACCA ACGCGAAGGG CGTGCCGATG AACGCGCTCG TGCTGTGCCT CGCCATCTGC
GTGTCGATCC TGGGCATTCA CTTCGTGAGC GGCGGCGATC TGTTCCTGAT GCTCGCGAAG
AGCAGCGGCG CGTTCGTGAT GATCGTGTGG ATCTTCATCA TCGTCGCGCA CTTCGCGATG
CGTCGGCAGA CGAAGCACGA GCAACGCGAC CCGACGGCGT TCCGCGCGTG GTTCTATCCG
GTGTCGAACT GGGTCGCGCT GCTGGCGCTG GTGGCCGTGC TGGGGTCGCA GGCGTTCAAC
CCGGATTCGC GCTTCCAGTT CTGGTTCACG GTCCTGACGG CGCTCGCGAT CGTCGCGGCG
TACTTCCTGC GGCGCAGGCA ACCGTCGTTC GGGCAGGCCG CCGGCGCGAA GAGTCGTTGA
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| Protein sequence | MQDNTLRQSL KQRHITMIAL GGVIGAGLFV GSGAIIATAG PAAILSYLIG GVIVTLVMFM
LGEMASRNPD SGSFSTYASS YLGEWAGFAV GWLYWFKSMM TITVEAILLG AILHDFLPWL
PIWGGALFML VTLIASNAYS VRSFGEAEYW LSFAKVATII VFMALGASIL LGFQPRIPAP
GLVNLTDHGG FMPNGISPVL AGVMVVIFSL GGSEIAAVAA GESENPSRNV IRAIKSVIVR
VMVFYVGSVS ILILCMPWTD KANLKSPYVS LFGMAGFTGA AVAMKIVLFV SFMSVMNSFL
FSNSRMLFSL SQRGHAPAMF GRTNAKGVPM NALVLCLAIC VSILGIHFVS GGDLFLMLAK
SSGAFVMIVW IFIIVAHFAM RRQTKHEQRD PTAFRAWFYP VSNWVALLAL VAVLGSQAFN
PDSRFQFWFT VLTALAIVAA YFLRRRQPSF GQAAGAKSR
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