Gene Bcenmc03_5273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5273 
Symbol 
ID6128083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2377109 
End bp2377960 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content65% 
IMG OID641652362 
ProductLysR family transcriptional regulator 
Protein accessionYP_001778890 
Protein GI170737630 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCA CCCTGGACGT CGACCTGCTG CGTACCTTCC ACGCCGTCGC GAAGCTCGGC 
CGCTTCAAGG ATGCGGCCGT TCATGTTAAC CGCAGCCCGT CGTCCGTCAC CGCGCAGATT
CAGAAGCTGG AAGAGATGGT CGCGCAGCGG CTGTTTACGC GAAACAACCA GGCGGTCGAA
CTCACGCAGT TCGGCCACAA GCTGCTGAGC GACACCACCG AGTTTCTGTT GAGCCACGAT
CGGCTCGTCG AATCGCTGTC GCCGCAGATG CTGACCGGCA AGCTGCGGCT CGGCATCCCC
GATTCCTACG CGGCGCATTT CATGGCGGAA TTCCTGCCGC GCTTCGCCGC CGACCGGCCG
CTGCTCGAAC TGACGGTCGA AGCGCGCTCC AGCGAAGAGC TGCAGTTGCT GTTCGCGCGC
GGCCAGCTCG ACATCACGAT CGCCGTGGTG CCGAAAGCGC TGCCGCACGC CGAGCTGCTC
AGCAAGACCC ATCCGGTGTG GGTCGCCGCG CGCACCTTCA AGTTCAATCC CGATGCGCCG
CTGCCGATCG CGGTGCAACT GCAGGGCTGC CCGTACCGCG ACACCGCGCT GAATGCGCTG
AAGAAGGCGA AGATCGCGCA CCGGATGCTG CTCGAAAGCG CCAGTTCGCC GGCGGTGGAA
GCGTGTATCG CGAACGGGCT GGCGGTCGGC CTGATCGAGC ACGATCGCGT GTCGGGCAAC
CTGACGAGCC ACGTCGCCGG CATCGTGCTG CCCGATCTGC CGCCGCACCT GATCACGGTG
CTGACGGACG ACAGCAATCG CGCCGCGCTG CATCTGCGCG ACGTACTGAA AAGCACGTTC
AGGATCGGAT AG
 
Protein sequence
MPRTLDVDLL RTFHAVAKLG RFKDAAVHVN RSPSSVTAQI QKLEEMVAQR LFTRNNQAVE 
LTQFGHKLLS DTTEFLLSHD RLVESLSPQM LTGKLRLGIP DSYAAHFMAE FLPRFAADRP
LLELTVEARS SEELQLLFAR GQLDITIAVV PKALPHAELL SKTHPVWVAA RTFKFNPDAP
LPIAVQLQGC PYRDTALNAL KKAKIAHRML LESASSPAVE ACIANGLAVG LIEHDRVSGN
LTSHVAGIVL PDLPPHLITV LTDDSNRAAL HLRDVLKSTF RIG