| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5225 |
|---|
| Symbol | |
|---|
| ID | 6128036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 2325905 |
|---|
| End bp | 2326450 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641652316 |
|---|
| Product | amine dehydrogenase |
|---|
| Protein accession | YP_001778844 |
|---|
| Protein GI | 170737584 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02659] methylamine dehydrogenase light chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGTGT TTGATTCATG GTTCGAGCGG TCGGCGCGCG GCGTCGCGCA GCACAGTTCG
CGGCGCAGCG CGATGGCGAA GCTCGGCAAG GTGCTGGTCG GTTCGGCGCT GCTGCCGTTG
CTGCCCGTCG ATCGCACCGC GTATGCGGCC GATGCGGCGT CGGGTCCGTC GGGCGCATCC
GGCGCCGCCG CCGCGGGTGC GAGCGACGAC CCGACGAGCT GCGACTACTG GAAATACTGC
GCGATCGACG GCTGGCTTTG CAGCTGCTGC GGCGGAACGT CGAGCAGTTG CCCGCCGGGC
ACGACGCCTT CGCCGATCAC GTGGATCGGC ACCTGCCGCA ATCCGCACGA CGGTTCGGAC
TACATCGTTT CGTACAACGA CTGCTGCGGC AAGACGTCGT GCGGCAAGTG CTTCTGCAAC
CGCAACGAGC GCGAGAAGCC GCTGTACAAG CTGTCGTTGA ACAACGACAT CAACTGGTGC
ATGGCGAACG GTAATTCGAA TTACCACTGT TCGGTTTCGG TTCTGCTGGG AGCGGCGAAG
CAATGA
|
|---|
| Protein sequence | MGVFDSWFER SARGVAQHSS RRSAMAKLGK VLVGSALLPL LPVDRTAYAA DAASGPSGAS
GAAAAGASDD PTSCDYWKYC AIDGWLCSCC GGTSSSCPPG TTPSPITWIG TCRNPHDGSD
YIVSYNDCCG KTSCGKCFCN RNEREKPLYK LSLNNDINWC MANGNSNYHC SVSVLLGAAK
Q
|
|---|
| |