| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_5188 |
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| Symbol | |
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| ID | 6127999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | + |
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| Start bp | 2279529 |
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| End bp | 2281124 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641652279 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001778807 |
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| Protein GI | 170737547 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.401101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG CGTCGCCGCT GCACGACGGG AGCGTCGCGC CGTCCGCGTT CGACGTGCCG
GCGCCCGCGC CGGCCGCGCA GCCGGTGCGC GGCATCCGGC TCGCGCTGCT GACGTTCGCG
CTGTCGCTCG CGACCTTCAT CGAAGTGCTC GACTCGACCG TGACGAACGT CGCGGTGCCG
GCAATCTCCG GCAGTCTCGG CGTATCGAAC AGCCAGGGCA CGTGGGTGAT CAGCTCGTAT
TCGGTCGCGG CCGCGATCGC GGTGCCGCTC ACCGGCTGGC TCGCCCGCCG CGTCGGCGAG
CTGCGGCTGT TCGTCGGCGC GGTGCTGTTG TTTACGCTGA CGTCGCTGCT GTGCGGGCTC
GCGCGCGACC TGCACGTGCT CGTGATCTGC CGCGCGCTGC AGGGGCTGTG TTCGGGGCCG
ATGGTGCCGC TGTCGCAGAC GATCCTGCTG CGCACGTTCC CGCCCGACAA ACGCACGATC
GCGCTCGCGC TGTGGGCGAT GACGGTGCTG CTCGCGCCGA TCTTCGGGCC GGTGGTCGGC
GGCTGGATCG TCGACAACTT CTCGTGGCCG TGGATCTTCC TGATCAACTT GCCGATCGGG
CTGTTCTCGT TCGCGGTGTG CACCGCGATG CTGCGCCCCG ACGCGCAGCG CGGCGCGGCC
GGCCCGATCG ACGTGCCGGG CATCGTGCTG CTCGTGATCG GCGTCGGCTC GCTCCAGGCG
ATGCTCGATC TCGGCCACGA CCGCGGCTGG TTCGATTCGC CGCTGATCGT CACGCTCGCG
GTGGTCGCGG CGCTCGCGAT CGTGTCGCTG CTGATCTGGG AAGCGGGCGA AGCGCATCCC
GTGGTGGATC TGAGCCTGTT TCGCGACCGC ACGTTCTCGT TCTGCGTGCT GATCATCTCG
CTCGGGATGA TGAGTTTCTC CGTGGTCGGC GTGGTGTTTC CGCTGTGGAT GCAGGCCGTG
ATGGGCTACA ACGCGTTTCA TGCGGGGCTC GCGACCGCGT CGCTCGGCGT GCTCGCGCTC
GTGTTCTCGA TCCTCGTCGG GCTGCATGCG CACCGCTTCG ATGCGCGCGT GCTCGCGACG
TTCGGCTTCC TCGTGTTCGC GGCCGTGCTC GCCTGGGACG CGCAGTTCAC GCTGAAGATG
ACGTTCGCGC AGATCGCAGC ACCCGGGCTG ATCCAGGGCA TCGGGCTGCC GTGCTTTTTC
ATCCCGCTGA CCGCCGCGAC GTTGTCGCGC ATTCCGGACG ACCGGCTCGC CGCCGCGTCG
AGTCTGTCGA ATTTCCTGCG CACGCTGTCG GCCGCGTTTG GCACCGCGAT GAGCGTGACG
CTGTGGGACA ACCGCGCGAC CTATCACTAC GACGTCGTGT CGCAGTCGGT CACGCATGCG
TCGGCGAACA CGCAACGCTT CGTGCATGCG CTGAACGCGA TGGGCGTGGA CGGCGTGCGC
GAGCTGACGA CGCTGCATCA GGTCGTGATG CAGCAGGCCT ACATGATGGC GACCAACGAC
ATGTTCTGGA TGGCGAGCAT GACGTGTCTC GCGCTCGCGG CGATGATGTG GCTGACGCGG
CCCAAGCGCG GCGCGGCCGC ATCGTTCGGG CATTGA
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| Protein sequence | MSTASPLHDG SVAPSAFDVP APAPAAQPVR GIRLALLTFA LSLATFIEVL DSTVTNVAVP
AISGSLGVSN SQGTWVISSY SVAAAIAVPL TGWLARRVGE LRLFVGAVLL FTLTSLLCGL
ARDLHVLVIC RALQGLCSGP MVPLSQTILL RTFPPDKRTI ALALWAMTVL LAPIFGPVVG
GWIVDNFSWP WIFLINLPIG LFSFAVCTAM LRPDAQRGAA GPIDVPGIVL LVIGVGSLQA
MLDLGHDRGW FDSPLIVTLA VVAALAIVSL LIWEAGEAHP VVDLSLFRDR TFSFCVLIIS
LGMMSFSVVG VVFPLWMQAV MGYNAFHAGL ATASLGVLAL VFSILVGLHA HRFDARVLAT
FGFLVFAAVL AWDAQFTLKM TFAQIAAPGL IQGIGLPCFF IPLTAATLSR IPDDRLAAAS
SLSNFLRTLS AAFGTAMSVT LWDNRATYHY DVVSQSVTHA SANTQRFVHA LNAMGVDGVR
ELTTLHQVVM QQAYMMATND MFWMASMTCL ALAAMMWLTR PKRGAAASFG H
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