Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_4640 |
Symbol | |
ID | 6128843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 1645024 |
End bp | 1648608 |
Gene Length | 3585 bp |
Protein Length | 1194 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641651732 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_001778265 |
Protein GI | 170737005 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0814409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0127622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCAGCA TCATTGCCAT AGTTGTCCTG ACTACGAGTC CGATCGATTC AGCAACGGTT GAAAATCTCG AAACATCGGC GCTTCGGTTG ACGCAACCTT CGCCAACAAA CCCGGGGTTG CCGCCGCAGA TTCCTGACAA GGCCCACGGT TTTGCGCTCA CGGCAGATGA ACGAAGCTGG CTGGCTTCGC TGCCTCCGAT CAAACTTGGC ATTGACCCTG AGTGGGCGCC GATCGCCTAC ATCGATGCCA ATGGTCGCCC GAGCGGCATC GTCGCCGACT ATCTGGCATA TATCTCGGAA TCCCTTGGCA TCAGATTTGC ACTGGTGAAA ACGAATTCAT GGGCAGAAAC CTTGTCCTTG GCGCAATCAG GTCAAGTGGA TGCGGCCGCG CCTGTCAATG CGCCGACCGG GCACGGCGAA GACTTGCTCT ACAGCACGCC GTTTATTACC CTTCCCGACG TCATCGTTAC CCGTCCCCAC GCGCTGCCGC AAGGCATCGT CGATCTCGCG GGCCGTCGAA TAGTTATTTC GGATCCGAGC GAGCTTCCCG CCAAGGTATT GCGCCAACTG CCAGACGCTG AAATTGCCGT GGCCACGAAC GCCTATCACG CGATGCAACA GGTAGCGGAT GGGCGCGCCG ACGCGTATCT CGGCAACGCG GCGATCGTCG ATTTCAACAT CAGGAGCTAT TTCCCGGGTG CGCTCAAGAT TGCATCGCCT GCCAATATCG AGAGTCGGTT GAGTATTTCG ATAAACCGCC GCTATGAAAG ACTGTTGCCC CTGATCAATA ACGCGATTGC CGCGATGCCA AAAATGGAGC AACAACGGAT TCGAAGCCGA TGGCTTTGGC CTCGCTATTC AGCCGGGCTG CCATGGAAGA CCTTCGAGCT TACGTTACTA GGTGCTGCGA TCATATTGGC GATCGTTACC ATCGCGTACG TCAGGCTTCG TCACGAGGCC CGTCAGCGGC TGGCGGTCGA ACACGAGCTG GCAGACCAGC TTAGCTTTCG TGAGGCGCTG ATGGAGTCAC TACCGTATCC GCTGGCCGCC AAAGATAGTG CGAACCGATA TATCGCGCTC AACCATGCCT ATGAAACCGC ATTCTCGGTG AAGCGTGAGG ACTTGATTGG TAGAACGACG CTGGAAGCCT TACCGGTGGA GCCCGCATGG AGTATGCAGA TCCACACGAT GAGCGAGCAA GTCCAGGATC AAAATCGAGC CCATCATGCC GAGGTCAACC TGCTGGACGG CGACCATAAG CTGCGGTCGT GGTTGTACTG GATGCATCCT TTTCAATTAC CAAGCGGAAA GCCAGGCGGC CTTCTGGTGA CGTTGGTCGA TGTGACGACC ATTCGCGACG CGGAACAACG TGCGCGTGCT TTGGATCAAC GTTTAAGACG CGTGACTTCT CATCTTCCAG TGGTCGTCTT CGAATTTCGT CGTACACCGG ATGGTGCACT AAGGTTTCCT TATGTAGGTG GCGATACGCG TGCCATGTGG GATCTGGACG CGCTGTCGAT GGAAGCCGAT GCGCTTACGG CGCTCTCGCG TGTCCACCCC GATGACAGGC CTCTCATTAA ATCCGCCGTC AAGTACTCGG CGCTTACCAT GACGCCGATC TCCATCGATT TTCGATGTGT TTCACATGGC CGCGAGCGAT GGATCCACAC CGACGCAACG CCACAAACGG AGCTAAACGG GACGATGTTC TGGAGCGGAG TCTGGTCGGA CGTCACTCAC GCCAAGGCGC AGGCGGAAGA GCTCGCCCGC GCGAAAGAAG CGGCTGAAAT AGCGGCAGCG TCAAAGTCTC GATTTCTCGC CACCATGAGC CACGAGATCC GCACGCCAAT GAACGGGATC ATAGGGATGT TGGAACTATT GCGCCACGAA TCGTTGAGCA CCAATCAGCA ACGGATGCTT CACATGATCG GGGAATCTGC GATGACCTTG ATGCAGATTC TTGACGACGT TCTGGATTTC TCGAAGATAG ATGCCGGACA CCTGGAGATC CTGACGGAGC CGACTGATCT ACGCGCGCTC GTGGACGGCG TCAGCGCCAT AGCCGCTACA TTGGCTCACG ATAAGGGCCT TGTCGTTCGC AATTCCGTCA GTAGCCAACT TTCCGCCGAA TTGAAGGTCG ACGGCCTGCG CCTTCGCCAG ATTCTCATTA ATCTGATAAG CAACGCAATC AAGTTCACGG AAAACGGCGA GGTTGGCATC GACATCTCGG TCTTCGACCA ACGCGAAGCG TGCCAACGTG TGCACTTTAC GGTACATGAC ACGGGTATCG GCATCGCGCC CGCGCAACTG CAATGCCTGT TCGCGCCTTT CACGCAGGCC GATAGTTCGA TCGTACGCCG CTTCGGCGGC ACTGGATTGG GTTTGGCCAT TTGCAAACGC CTGGTCGAGC TGATGCATGG ATCCGTTCAC ATCGAGAGCA CTCCGGGTTT CGGCACTCGG GTCACGGTTA AACTGGACCT TGACGTGCAG CTCCAGATCC GTTCCACGCC GTTAGCGGGA AAGCATGCCC ATATCGCGTC GTCCGACCCG GCGCTAGCCG CAGCGTTACG CGAACTCTTG ATACCGCTCG GTATCATCCC CGTGGGAGCT GCCTCACAGG CAGACATACA CTTTGTCGAC GAAAGTCGAC TCGAGGAAAT TGATAACGAC AAGCCAGCTA TCGGACTAAC GGTCGACCCG ATCCCAACGG GCTACGAGAT TTCGGCTGAC GGCACGTGTC GGCTCAGCCA CAATCCGTTG ATGTACTCCG CGGTCGAAGC ACTTTGCCTA CATGTCGTCG GTGCAACTCG ATCTGCCGAG ACCGATATCC GGCATCTGCA TGTTGAATAT CAAACTTCGG GGCTTCAAAT TCTTGTCGTC GACGACCATC CGGTCAATCG CCTTGTCACC AAGGCGCAAC TTGAACGACT CGGTTATACC GCTGTTGCGG TATCCAACGG CATGGACGCA CTCCGAGTAC TGGATAATTC CGATTTCGCA TTGATACTCA CCGATTGCGC GATGCCGGAG ATGGACGGCT ATGAATTGAC GAAACGCATC CGCTCCCGGG AACATCGATC ACGGGATACC CCCATTGTCG CCTTAACTGC AAACGCATTG CCCGACGAAG CAATTCGATG CGCGGAAGCC GGCATGGACG GCCTGCTCAT CAAACCGACC ACCTTAGCCG TGCTGCGTGA CCAACTCGCG CATTGGATCG AGATTTCGCC TTGCCGGACA CGGACAGACT CCATGAGCAG TCTCGCCCGG CATCGCTTGC CCGAAGAAGG CGCATACCCG TCGAGATTGA TTCAAGGATT CGTGACAGAG ACCTTGAAGG ATATTGCTTT CCTTCATGCA GCAGTAGCCG ACAGCAACGC GGCAGCCGCC GCCGACCGCA TCCATCGGAT AGCTGGCGCA AGCAAATTGT TCGGCTCAGG TGTCTTGGGC GATTATGGTG AAAAACTGGC CACCCAACTT CGGCTGGGTG GCCTCTCGGG TCAAGAGGCG GCATTGGCAG TCTTTTGCAC CAAAGTCGAA CAACTCATCA CACGGCTTAA CACATTGATG AAGGGAACCA CGTGA
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Protein sequence | MSSIIAIVVL TTSPIDSATV ENLETSALRL TQPSPTNPGL PPQIPDKAHG FALTADERSW LASLPPIKLG IDPEWAPIAY IDANGRPSGI VADYLAYISE SLGIRFALVK TNSWAETLSL AQSGQVDAAA PVNAPTGHGE DLLYSTPFIT LPDVIVTRPH ALPQGIVDLA GRRIVISDPS ELPAKVLRQL PDAEIAVATN AYHAMQQVAD GRADAYLGNA AIVDFNIRSY FPGALKIASP ANIESRLSIS INRRYERLLP LINNAIAAMP KMEQQRIRSR WLWPRYSAGL PWKTFELTLL GAAIILAIVT IAYVRLRHEA RQRLAVEHEL ADQLSFREAL MESLPYPLAA KDSANRYIAL NHAYETAFSV KREDLIGRTT LEALPVEPAW SMQIHTMSEQ VQDQNRAHHA EVNLLDGDHK LRSWLYWMHP FQLPSGKPGG LLVTLVDVTT IRDAEQRARA LDQRLRRVTS HLPVVVFEFR RTPDGALRFP YVGGDTRAMW DLDALSMEAD ALTALSRVHP DDRPLIKSAV KYSALTMTPI SIDFRCVSHG RERWIHTDAT PQTELNGTMF WSGVWSDVTH AKAQAEELAR AKEAAEIAAA SKSRFLATMS HEIRTPMNGI IGMLELLRHE SLSTNQQRML HMIGESAMTL MQILDDVLDF SKIDAGHLEI LTEPTDLRAL VDGVSAIAAT LAHDKGLVVR NSVSSQLSAE LKVDGLRLRQ ILINLISNAI KFTENGEVGI DISVFDQREA CQRVHFTVHD TGIGIAPAQL QCLFAPFTQA DSSIVRRFGG TGLGLAICKR LVELMHGSVH IESTPGFGTR VTVKLDLDVQ LQIRSTPLAG KHAHIASSDP ALAAALRELL IPLGIIPVGA ASQADIHFVD ESRLEEIDND KPAIGLTVDP IPTGYEISAD GTCRLSHNPL MYSAVEALCL HVVGATRSAE TDIRHLHVEY QTSGLQILVV DDHPVNRLVT KAQLERLGYT AVAVSNGMDA LRVLDNSDFA LILTDCAMPE MDGYELTKRI RSREHRSRDT PIVALTANAL PDEAIRCAEA GMDGLLIKPT TLAVLRDQLA HWIEISPCRT RTDSMSSLAR HRLPEEGAYP SRLIQGFVTE TLKDIAFLHA AVADSNAAAA ADRIHRIAGA SKLFGSGVLG DYGEKLATQL RLGGLSGQEA ALAVFCTKVE QLITRLNTLM KGTT
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