Gene Bcenmc03_4638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4638 
Symbol 
ID6127456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1643837 
End bp1644766 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content61% 
IMG OID641651731 
Producthypothetical protein 
Protein accessionYP_001778264 
Protein GI170737004 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0730129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00519194 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGCAAC TCAACGTGAC AGAAGGGGTG CTGGCTTCCA GCCTGCAGGT GCTTACGACA 
TTCGATCTAA TCTGGATCGT TGCTGCGCTT GTACTGGGCG GAATGGCCAA GGGCATCACT
GGCATTGGTG TGCCGCTGGT TGCGATGCCG ATCGTCAGCC AGTTCATGCC GATTCGAGAT
GCAGTATTGC TGCTGTCCAT GCCGATCATT CTCGGCAACA TTCCGCAGGC GCTGGAAGGT
GGTCAGGTGC TTGCAACGGC GCGGAAGATC GCCGCGCCGA TCGCGGGGAC GGTGTTCGGT
AATATCGCCG GCGTGGCGAT CCTGCTTTCG TTGAACTCGG GTCACGCACA GGCAGCCTCT
GGCGCACTGC TGATTGTGGT CGCGACGCTG ATGCTCGCGG CACCGAAGCT CAATTTGGAA
CCCGCATGGC GCAAACCTGT TGGTTTCGTG CTCGGCTTCG GTGCGGCAGT GACGGAAAGC
ATTGCATCGG TTCCCGGCCC GTTGCTCGCC ACTTACTTGA TTTCGTCCGG AGCGAGTGGC
CGGGCGTTTA CGAAGCAGAT CGCGATCATC CTCGTGGTAT CGGTCGTCAC GCTGCTCACT
ACGTTCAGCG GTGCGGCGCA GGCGAGCGGT GCGGATCTCG TGATCTCGGC GGCCGCCACG
CTGCCAGCGA TTGCTGGCAT GTGGCTGGTT CGTCCGCTGC GGGACCAGAT GTCCCCTGAA
ATTTTCAGGA AGGTCGTCCT GCTGCTCGTG CTCGTCGCAG CGACGCAAAT GATCTGGAAA
TCCGGCGTGT TTCGACACGG CGGATCATCC GCCACCGATG CGTGCATCCG GCACGCGATC
GAGCTGCACC ATATGTGTAT GTCGCGCTCG AGCTCGCCGC CCGAGGCGCA CACACGCATT
CGAATTCCGC ACATATGTGC GATGGGCTGA
 
Protein sequence
MMQLNVTEGV LASSLQVLTT FDLIWIVAAL VLGGMAKGIT GIGVPLVAMP IVSQFMPIRD 
AVLLLSMPII LGNIPQALEG GQVLATARKI AAPIAGTVFG NIAGVAILLS LNSGHAQAAS
GALLIVVATL MLAAPKLNLE PAWRKPVGFV LGFGAAVTES IASVPGPLLA TYLISSGASG
RAFTKQIAII LVVSVVTLLT TFSGAAQASG ADLVISAAAT LPAIAGMWLV RPLRDQMSPE
IFRKVVLLLV LVAATQMIWK SGVFRHGGSS ATDACIRHAI ELHHMCMSRS SSPPEAHTRI
RIPHICAMG