| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4520 |
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| Symbol | |
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| ID | 6127342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 1503104 |
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| End bp | 1505887 |
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| Gene Length | 2784 bp |
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| Protein Length | 927 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641651617 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_001778150 |
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| Protein GI | 170736890 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATATCC GAGAGTCATT CCGCAATTTC GTATCGGGAA TCGATGCGAA TCGCCGGCCG
GTCGTGCTGA ATTGGGGTAA GGCGCAGCAC GCGCTGGGGT CGAAGATCGC GTTGCAGCAC
GCGAGCATTC GTGAAAGCAT GATGACCGGC ATCAGCGGTC ATTTGACCTG CATCTCTCAG
CAGGGCGATC TGCCTCCGAA GCTTTTCATT GGTGCGCCAG TCTCAATCGG TATCGTCACG
GACCGCGGCC AACTGCATGC CATCAACGCA ATCATTAGCG CCGTTCAGGT CGGCCGGACC
GACGGGGAGC TGACGGTTTA CCAGTTCACC GTGACCGACG CGTTGAACCT GCTGCACAAG
CGCACCAACT CTCGCATTTT CCGCAACGTC AGCGTGGTCG ATGTACTTGG CGTCGTCCTG
AGCGAATGGC GACAGCGTAG TGTGGCCCTT GCGCAGGCGT TTGAGTTCGA CCTGTCGCAA
CTCGACAGAT CCCGCTATCC GGTTCGCTCT TTCGTACGTC AGGTCAACGA ATCTGATGCC
CGTTTCATCT CCCGGATTGC GCGTCGCGAC GGCATCACGC TGTTCGTGCG CGCCGGACGG
GTAAGCGGGG AGACGAAAGA CGGCGATCCT CCCGTGCATG CGCTGGTGTT CTGCGATGAC
CCTCGGAAAC TGGGCGAGTC CACCGCAGGT ACGGTGCGGG TTCATCCACG AGATGCTGGA
ACGGAACAGC GCGACACCAT CACCGCTCTG ACGATGCGTC AGCAACTGAT TTCGGGGGAA
TCGGGCCGCC CTTCGTGGGA TTATCGATAT GCCCGCGTGG ACCAGTCCAG TGCATCGACA
AGGATCGATC AAGGCGAATC GGGTAACGAT CTCGCGAAAT TGCTGACGGA CATCGTGATC
GACGTCCCGC ATATGGCGGA CTCGTGGGCA GATCACGAAC GGATGACGGA AGATCGCATT
CTGGCTCATG AAGCGCAGGC GGTGCGATAC GACGGCGTGA GCGGAATTCG CGACCTTGCA
GTCGGCTCAT GGATCACGAT CGCCGGAGAG GACGAGTGGG GCGCGCTCCC GTCCGACAAG
CAGCAATTCG TGATTACATC ATTGCACCAC GAGATCTGGA ACAATCTGCC CAAAGGGTTG
AGCGAGCGTG CGCAGGCACT GTTCGCCGCC AGCCACACGC TTCAGCAACC ACGATCGGTG
AGCGATGGCG ACCCGTCTGG TCAGGATACG CGCTACGAAA ATACGTTCTC GTGCGTGCCG
CGTGGCACGC CTCTCACGCC GCTTTACGAT CCCAAGACGG ACCTTCCGCC GACGCCGTTG
ATTACCGGGC GCGTGGTCGG GGCCGATGGC GAGGAGGTCA GTTGCGACGA GAATGGTTGC
GTGTTCGTGC AGATTCTCGG CCAGGATTCT CGCGATCATG CGCATGCGCA GGGTGCCGGG
ACAAACAGCA ACGAGAGCGA CAGCGCACCG ATTCGCGTGG CATCCAGTCT GGCTGGGCCG
AATTTCGGCG AGACGTTCTT GCCGCGGGTG GGCACCGAAG TTCTGCTCGG GAGCCTCGGC
GGAGATCCGG ACAGGCTGGT CATCATCGGC GTACTGGCAA ACGGCGCGAA CATGCCCGCG
AGTTTCACTC ATACCGGCAG TTTGCCGGGC AATCGCTTTC TTTCCGGTAT CAAGACGAAG
GAAATCAAGG GGCAGCGCTA CAACCAGCTT CGTCTCGACG ACACACCGCA GCAAATCAGC
GCGCAGCTTG CATCGGAGCA CGCGCATAGT CAGTTGAATC TCGGCTATCT GACGCAACCG
CGTGATAACG GACAGGGTGC TGACCGCGGC CAAGGTGCCG AATTGCGTAC CGACGCGGCA
GCCGCATTGC GCGCGGCGCA AGGGATGCTT TTGACCACCT ACGCGCGTAC TCAGGCGAGC
GGCGGACAGC TTGATCGCGA TGAACTCGTC GAATTGCTCG GCGAATGCGC GGAGCTGTTC
AAGGCGTTGG GAGATTACGC CGGACAGCAC GGTGGCACGG CGACCGATGC GACGGGGCAG
CAAGCTGTCG TGACCGCCTT CAAGGGTTGG GCGCCGGGCG GCCATGCGTC AGGCGGCGAT
CGTGCGCCGA ACGCCGACGC AGGCGGTTCT CAGGCGCTGA TGGCATTTGG CGCAAAGGCC
GGTGCGCTCA ATATCACTCC CAAGACTTAC GTGACCTACG CCGGCGAGAA CATCGATCAG
ATCGCGCAGC AGAACCTGCA ATTCGCCGGG GGGCAGCGCG TGATCACGAC GGCTGGCAAG
GGCATCCACC TGTTCGGGCG CGGAGAAGGC GTCCGCGCGA TTGCGGGCGA AGGCCCCGTT
GTCTTGCAGG CGCAACAGGA CACGCTTGCG GCGACCGCGC AGAAGGGGAT ACAGATCATG
TCGGTCGGCG ACGAAGTGTT GATCTCGGGC AAGTCGATCC GGCTCGTCGC GGAAGACGGA
AGCTACGTGA AGGTTGGTGG CGGCGTCGAG GTCGGTTCCG ACGGTGCGTT CACCGCATAC
ACGGCGGGAC ATGATTTCGT CGGTCCGAAG ACGGACCACG TTGCGCCGCC GGCGTTCAAT
CGCGGAGGAG CCGATCAGAA GTTCCGCTTG CGGTACCCGG GCACCGACGG TGACGATGGC
ACGCATCCCG TGCCGAATCG TCCGTACAAG ATCACGCTGC GCAATGGCCA GGTCATTAAC
GGTGTCTCGG ATGCACACGG GTTGACGGAG CTTGCATCGA GCGACGCGAT GCACATTGCA
CACATTCAGG TTTTCGACGC TTAA
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| Protein sequence | MNIRESFRNF VSGIDANRRP VVLNWGKAQH ALGSKIALQH ASIRESMMTG ISGHLTCISQ
QGDLPPKLFI GAPVSIGIVT DRGQLHAINA IISAVQVGRT DGELTVYQFT VTDALNLLHK
RTNSRIFRNV SVVDVLGVVL SEWRQRSVAL AQAFEFDLSQ LDRSRYPVRS FVRQVNESDA
RFISRIARRD GITLFVRAGR VSGETKDGDP PVHALVFCDD PRKLGESTAG TVRVHPRDAG
TEQRDTITAL TMRQQLISGE SGRPSWDYRY ARVDQSSAST RIDQGESGND LAKLLTDIVI
DVPHMADSWA DHERMTEDRI LAHEAQAVRY DGVSGIRDLA VGSWITIAGE DEWGALPSDK
QQFVITSLHH EIWNNLPKGL SERAQALFAA SHTLQQPRSV SDGDPSGQDT RYENTFSCVP
RGTPLTPLYD PKTDLPPTPL ITGRVVGADG EEVSCDENGC VFVQILGQDS RDHAHAQGAG
TNSNESDSAP IRVASSLAGP NFGETFLPRV GTEVLLGSLG GDPDRLVIIG VLANGANMPA
SFTHTGSLPG NRFLSGIKTK EIKGQRYNQL RLDDTPQQIS AQLASEHAHS QLNLGYLTQP
RDNGQGADRG QGAELRTDAA AALRAAQGML LTTYARTQAS GGQLDRDELV ELLGECAELF
KALGDYAGQH GGTATDATGQ QAVVTAFKGW APGGHASGGD RAPNADAGGS QALMAFGAKA
GALNITPKTY VTYAGENIDQ IAQQNLQFAG GQRVITTAGK GIHLFGRGEG VRAIAGEGPV
VLQAQQDTLA ATAQKGIQIM SVGDEVLISG KSIRLVAEDG SYVKVGGGVE VGSDGAFTAY
TAGHDFVGPK TDHVAPPAFN RGGADQKFRL RYPGTDGDDG THPVPNRPYK ITLRNGQVIN
GVSDAHGLTE LASSDAMHIA HIQVFDA
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