| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4307 |
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| Symbol | |
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| ID | 6127135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 1267622 |
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| End bp | 1270921 |
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| Gene Length | 3300 bp |
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| Protein Length | 1099 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641651410 |
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| Product | outer membrane autotransporter |
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| Protein accession | YP_001777943 |
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| Protein GI | 170736683 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.157591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000542564 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGATTC TCACCGGCGC GGTGCCGGTC AGTGCGTATG CGGCGTGCTC GGCTACCGCG
CCGGGCAGCG GCACGACGGT GACGTGTACC GGCGCGAACG CGCCGTCGGT CGTGGCCACG
GCCGGCAGCA CCAACGTGAC GATCAACCTC GATTCGACCG TGACGGGCAG CTACGTGCTG
ACGTCCACGC CGACGCCGTT CTCCATAGAT ACGTCGAGCA CGATCACCAA CAACGGCAAC
CTGTCGATGT CCGGCAACGG TACGGGCGTC GCGAATCGCG GCGCGGTGCT GCTCGGCGTG
AACAACGGCA ACACGCTCAC CAATGCGGCG ACCGGCGTGA TTTCGACGTC GGGCACCTAC
AACGACGGGA TGGCCGCGAA CGGCAACAAC AACACGCTCG TCAACAACGG CACGATCACG
ACCACCGGCA ACAACGCGTA CGGGATGACG GCCGCGTGGG GGCAAAGCAA TCCCGGCGCA
TCGGGCAACC AGATCGTCAA CACGGGCACC GTGACGACAT CCGGCAACAA TGCCCGCGCC
GCGTCGCTGC TCGGCGGCAA CGGTACGATC ACCAACAGCG GCACGCTGAC GTCGAACGGC
CGCGATGCGC CGGCCGTCTA CATGCAGGGC AACAACGACA CGCTCGTCAA CAGCGGCACG
ATCCAGACCA CCGGCACCGC GACCAGCGGC GGCAGCGTCG ACGCCGTCGT ATCGAACACG
CTCGGCAGTT CGTTCACCGC GACGATCACG AACCAGGCCG GCGGCAGGAT CATCAGCAAC
AACGGCATCG GCGTGCGCTC GACCAACGGC GCGACGACGA TCACCAACGC GGGGCTGATC
CAGGGCGGCG GCGGCACCGC GATCCAGGGC GGCAACGGCA ACGTGACGCT GATCCTGCAG
ACGGGCTCGC AGATCGTCGG CACGGCCAAC GGCGGCGCGG GCACCAACAC CGTGACGTTG
CAGGGCACCG GCACCGCGTC GAATGCGTTC ACGAATTTCC AGAGCCTGAC GATGGCCGGC
GCCGACTGGA CGTGGGCCGG CACCGGCACG TTCTCGACCG CGCTGGTGCA GAGCGGCACG
CTGAACCTCA CGGGCACGCT CGGCACGACG ACGGCGTCGG TCGTCGCGAC CGTCAACGCG
GGCGCGACAC TGCAGGCGAA TGCGTCGAAC CTGCCGCTGT CCGTCACCGA CAACGGGCTC
GTGCGCTTCC AGCAGGACAG CGCCGGCACG TACACGGGTA CGATCAGCGG GTCGGGCGCG
GTGGAGAAAA CCGGCGCGGG TACGTTGACG CTCACGCCGT CCGCGGCGGG CGGCAATACG
TATTCCGGCG GCACGACGAT CACGCAGGGC ACGCTATCGG TTGCGGCCGA CAACGCGCTC
GGTGCGGCGT CGGGACCGCT GACCTTCAAC GGCGGCACGC TGCAACTCGG CAGCGCGTTC
GATCTCGCGG CGAGCCGCGC TATGTCGATC ACGTCGAACA ACGGCACGAT CGATACGCAG
GGTTTCAATT CCACGATCAC GCAGAACATC ACCGGCACGG GCGGACTCAC CAAACTCGGG
GCCGGCACGC TGACCTTGAA CGGCGCGAAC ACCTATGCCG GCGGCACGGC CCTGAATGCC
GGCACGCTCG TCGTCGGTGA CGCCGCGCAC GCGTCCGCTG CGCTGGGCGG TGGCGGGCCG
GTGACGGTGG CGTCAGGCAC AATGCTCGGC GGCTACGGCG GCGTGACGGG CAACGTGACG
AACAACGGCA CGCTCTCGGT CGCGAACGCG CTGGCGAGCC TTGCCAGCGG CGCGACCGGC
AATTTCCGGA TCAACGGCAA CCTGACCAAC GCGGGGCTCG TTCAGCTCGG CGGCAGCGGC
GTGGGCAACA CGCTGACGGT CGCGGGCAAC TACGTCGGCC AGAATGCGAC GCTCGCGCTG
AACACGACGC TGGCCGGCGA TGGCGCGCCG TCGGACAAAC TGGTCGTCAG CGGCGGCACG
GCGAGCGGCT CGAGCACGCT GAAGGTGACG AACGTCGGTG GCGCGGGCGC GCAGACGACG
GGCGACGGCA TTCAGGTCGT GCAGGCGACG AATGGCGCGA CCACGAGCGC GAACGCGTTC
TCGCTGTCCG GCGGGACGGT CAGCGCCGGC GCGTACACGT ACTTCCTCGC GAAGGGGGGG
GAGTCGAATG GCACAGGCGA CAGCTGGTAT CTGCGCAACA CGGTGCCGCC GAAGCCGCAG
CCGCCCGTTG TTCAGCCCGG CCAGCCGACG CCGCCGGCCG AGCCGCCGAT CATGGCAGCC
GAAGGCACGC CGGAATCGAT CGTCGAAGCG GTCGACCATG CCGGCGTCGG TGGTACGCCA
GAACCGGTCT ATCGCCCCGA AGTGCCGCTG TACGCGGAAG CGCCGGCCGT CGCGCGTCAA
CTCGACCTGC TGCAGATCGA TACGTTCCAC GACCGTCAAG GCGAGCAAGG GTTGCTTGCC
GAAAACGGTT CGGTACCCGC ATCGTGGGTG CGTGTATGGG GCGGCAACAG CAACATCAAG
CAGAAGGGTG ACGCGACGCC GTCGTTCGAC GGCACGGTGT GGGGGATGCA GGTCGGGCAG
GATCTCTACG CCGATACGAC CGCCAGCGGC CATCGCAATC ACTACGGTTT CTTCCTCGGC
TTCTCGCGCG CGGTCGGCGA CGTGAAAGGC TTCGCGCTCG CGCAGCCGGA CCTGGGCGTC
GGCTCGTTGC AGGTGAATGC GTACAACCTC GGCGGCTACT GGACGCATAT CGGCCCGGGC
GGCTGGTACA CGGATGCGGT GCTGATGGGC AGCGCGCTGA CCGTGCGCAC GCATTCGAGC
GACATCGTCA ACGGCTCGAC GAACGGCAAC GCGTTCACGG GTTCCGTCGA AGCCGGGCTG
CCGATCGCAC TGGGTAACGG GCTGACGCTC GAGCCGCAGG CGCAGCTCGT GTGGCAATGG
CTGTCGCTCG ACCGCTTCAA CGACGGCGTG TCGAGTATCG CGTGGAACAA CGGCAATACG
TTCGTCGGCC GGATCGGCGC GCGGCTGCAA TACGCGTTCG ATGCGAGCGG CGTGAGCTGG
AAGCCGTACT TGCGCGTGAA CGTGCTGCGT TCGTTCGGCA CCGACGACAA GACGACGTTC
GGCGGTTCGA CGACGATCGG CACGCAGGTC GGGCAGACGG CCGGACAGAT CGGCGTGGGC
CTCGTCGCGC AACTGACGAA GCGCGGCAGC GCGTATGCGA CGGTCAGCTA TCTGACGAAC
CTCGGTGGCG AGCACCAGCG CACGATTACC GGCAATGCAG GCGTGCGGTG GGCGTGGTGA
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| Protein sequence | MAILTGAVPV SAYAACSATA PGSGTTVTCT GANAPSVVAT AGSTNVTINL DSTVTGSYVL
TSTPTPFSID TSSTITNNGN LSMSGNGTGV ANRGAVLLGV NNGNTLTNAA TGVISTSGTY
NDGMAANGNN NTLVNNGTIT TTGNNAYGMT AAWGQSNPGA SGNQIVNTGT VTTSGNNARA
ASLLGGNGTI TNSGTLTSNG RDAPAVYMQG NNDTLVNSGT IQTTGTATSG GSVDAVVSNT
LGSSFTATIT NQAGGRIISN NGIGVRSTNG ATTITNAGLI QGGGGTAIQG GNGNVTLILQ
TGSQIVGTAN GGAGTNTVTL QGTGTASNAF TNFQSLTMAG ADWTWAGTGT FSTALVQSGT
LNLTGTLGTT TASVVATVNA GATLQANASN LPLSVTDNGL VRFQQDSAGT YTGTISGSGA
VEKTGAGTLT LTPSAAGGNT YSGGTTITQG TLSVAADNAL GAASGPLTFN GGTLQLGSAF
DLAASRAMSI TSNNGTIDTQ GFNSTITQNI TGTGGLTKLG AGTLTLNGAN TYAGGTALNA
GTLVVGDAAH ASAALGGGGP VTVASGTMLG GYGGVTGNVT NNGTLSVANA LASLASGATG
NFRINGNLTN AGLVQLGGSG VGNTLTVAGN YVGQNATLAL NTTLAGDGAP SDKLVVSGGT
ASGSSTLKVT NVGGAGAQTT GDGIQVVQAT NGATTSANAF SLSGGTVSAG AYTYFLAKGG
ESNGTGDSWY LRNTVPPKPQ PPVVQPGQPT PPAEPPIMAA EGTPESIVEA VDHAGVGGTP
EPVYRPEVPL YAEAPAVARQ LDLLQIDTFH DRQGEQGLLA ENGSVPASWV RVWGGNSNIK
QKGDATPSFD GTVWGMQVGQ DLYADTTASG HRNHYGFFLG FSRAVGDVKG FALAQPDLGV
GSLQVNAYNL GGYWTHIGPG GWYTDAVLMG SALTVRTHSS DIVNGSTNGN AFTGSVEAGL
PIALGNGLTL EPQAQLVWQW LSLDRFNDGV SSIAWNNGNT FVGRIGARLQ YAFDASGVSW
KPYLRVNVLR SFGTDDKTTF GGSTTIGTQV GQTAGQIGVG LVAQLTKRGS AYATVSYLTN
LGGEHQRTIT GNAGVRWAW
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