Gene Bcenmc03_4297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_4297 
Symbol 
ID6127125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp1254005 
End bp1255351 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content69% 
IMG OID641651400 
Producthypothetical protein 
Protein accessionYP_001777933 
Protein GI170736673 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID[TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.90094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.321538 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTATT CGGAATCGCG CTTCTGGCAT CCCCGGCAAC ATCCGCTCGC CGCGTCGCGC 
TCGCCGATCC GCATCACGCG CGGCGAAGGC TGCTACCTGT ACGACGACAC CGGCCGGCCG
TATCTCGACG CGGTCGCGTC GCTGTTCAAC GTGTACGTCG GCCACGGCCG GCGGGAGATC
AAGGAAGCGA TCGTCCGGCA GCTCGACGAA CTCGAATATC ACCCGGTGTT CGCCGGGTTC
AGCCATCCGC GCGCGGAAGA ACTGTCGGCG CGGCTGATCG ACATGCTCCA GCCGGAAGAC
ATGAGCCGCG TGATCTTCGG CTCCGGCGGC TCGGACGCCG TCGAGGCCGC GCTGATGATC
GCGCGGCAGT ACTGGAAGGT GTCCGGGCAG CCCGAGCGCA CCAAGTTCAT CGCACTGCGC
CAGGCCTATC ACGGCTCGCA CTTCGGCGGC AGCTCCGTCA CCGGCAACAC CGTCTACCGG
CGCAACTACG AGCCGACGCT CGCCGGCTGC TTCCACGTCG AGACGCCGTG GATCTATCGC
AACCCGTTCA CGCATGACCC CGAGGAACTC GGCCGGCTGT GCGCGTCGCT CGTCGAGCGC
GAGATCCTGT TCCAGGGGCC CGATACCGTG GCCGCCTTCA TCGCCGAACC GGTGCAGGCG
ACCGGCGGCA TCATCGTGCC GCCCGCGAAC TACTGGCCGT TGGTGCGCGA AGTGTGCGAC
CGCCACGGCG TGCTGCTGAT CGCCGACGAA GTCGTGACGG GCTTCGGGCG GACCGGCGCC
GCGTTCGGCA GCCGCGGCTG GGGCGTCGCG CCGGACATCA TGTGCCTGGC GAAGGGCGTG
TCGTCGGGAT ATCTGCCGCT GGGTGCGACC GTCGTCAACC GCCGCATCGA GAACGCGTTC
GCGTCCAACC CGGGCGGCAT CGGCACGCTG ATGCACGGCT ACACCTACTC GGGCCATCCG
ATCGTCTGCG CGGCCGCGCT CGCGAACCTG CAGATCATCG TCGACGAGGA TCTCGCCGGC
AACGCGGCGC GCGAAGGCGC GTACCTGCTG GAACGGCTGC AGCCGCTCGT CGACCGCTAT
CCGGTGGTCG GCGACGTGCG CGGCAAGGGG CTGCTGGTCG GCATCGACCT CGTGAAGGAC
AAGACGACGC GCGAATCGAT CGAGCCGTCG GACGGCTATG CGGCCGCGCT CGCCGACGCG
GCGCGCGATG CGGGCGTGCT GATCCGCTCG CTCGGCAACC GGCTCGCGAT CGCGCCGCCG
CTCGTGATCG GTCGCGAGGA CGTCGACCGG ATCGTGCACG CGGTCGAGCA CGCGTTCGAA
ACGGTGCCGC GCTGGACCGC ACGCTGA
 
Protein sequence
MSYSESRFWH PRQHPLAASR SPIRITRGEG CYLYDDTGRP YLDAVASLFN VYVGHGRREI 
KEAIVRQLDE LEYHPVFAGF SHPRAEELSA RLIDMLQPED MSRVIFGSGG SDAVEAALMI
ARQYWKVSGQ PERTKFIALR QAYHGSHFGG SSVTGNTVYR RNYEPTLAGC FHVETPWIYR
NPFTHDPEEL GRLCASLVER EILFQGPDTV AAFIAEPVQA TGGIIVPPAN YWPLVREVCD
RHGVLLIADE VVTGFGRTGA AFGSRGWGVA PDIMCLAKGV SSGYLPLGAT VVNRRIENAF
ASNPGGIGTL MHGYTYSGHP IVCAAALANL QIIVDEDLAG NAAREGAYLL ERLQPLVDRY
PVVGDVRGKG LLVGIDLVKD KTTRESIEPS DGYAAALADA ARDAGVLIRS LGNRLAIAPP
LVIGREDVDR IVHAVEHAFE TVPRWTAR