| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_4082 |
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| Symbol | |
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| ID | 6126915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010515 |
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| Strand | - |
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| Start bp | 1021752 |
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| End bp | 1022840 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641651190 |
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| Product | porin |
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| Protein accession | YP_001777723 |
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| Protein GI | 170736463 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0820071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA GGTTTGGTGT ATTGGCGATG CTCGCCGTGA CACAAGGCGC GTGGGCGCAA
AGCAGCGTGA CGATGTTCGG GCTGATCGAC TCCGGCATCA CGTACGTCAG CAACGAGGGC
GGCGGAAAGA ACGTCAAGTT CGACGACGGC ATATTCGCGC CCAACCTGTT CGGCCTGCGC
GGCACCGAGG ATCTCGGCGG CGGATATCGC GCGACGTTCG CGCTCGTGAA CCAGTTCTCG
ATGGCGAACG GGAGCATCGT CGGGACCGGG ATTTTCGGCC GCAACGCCTA CGTGGGCGTC
GAGAGCGATC GGTTCGGCAG CATCACGCTG GGCAATCAGT ACGACTTCAT GGTGGATACG
CTCTTTTCAA AGGGCAACGC GATTTCGCGG GACATTTCCG GGTTGTACGG TTTTCGGAAC
GGCCCGTTCC AGCGTCTCGC GCTGCCGGGC AATCCGACCG GCGCGTTCGA CTGGGACCGC
ACGGCCGGCA GCAAGCCGAT CGCGAATTCG GTCAAGTACA GCTCGCCGAC GGTCGCGGGT
TTTTCCGGCG GCGTGATGTA TGCGTTCGGC GGCGTGGCCG GCTCGGTCGG TGCGGACAAC
GCCGTCAGCG CCGGCGTGAA CTACGAACTG GGGGCCTTCG GCGTGGGCGC GGCCTATACG
AACGAAAAGT ACGGCCCGGC GCCGGGCGTG CCGTCGACCA GCGTGCGCAA TTGGGGTGTC
GGCATGCACT ACGACTTTGG TGTCGTGACC GCGAAGGCGC TGATGACCAC CGTGCGCAAT
TCGTTCAACG ATGCGGGCGT GTGGATGGCC GAGGCCGGCG GCTTGTGGCG GATCAGGCCG
GATGTCGTGC TGGGTGCGAA ATACATGTAC ATGAAGGGCA ATGAAGCGGT GAACGACAAC
CATGCGCATC AGATCAGCGT CGCGCTTCAA TACCTGTTGT CGAAGCGGAC GATGGTGTAT
GTGTCGGCGG ATTATCAGCG CGCGAATAGC GGCGCGAATG CGCAGGTGAA TGGTGTGTTG
GACCCGAACG GGGCGTCGAG TTCCGCGAGT CAGGCGGTGG CGCGGATGGG GTTGCATACG
GTGTTTTGA
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| Protein sequence | MKLRFGVLAM LAVTQGAWAQ SSVTMFGLID SGITYVSNEG GGKNVKFDDG IFAPNLFGLR
GTEDLGGGYR ATFALVNQFS MANGSIVGTG IFGRNAYVGV ESDRFGSITL GNQYDFMVDT
LFSKGNAISR DISGLYGFRN GPFQRLALPG NPTGAFDWDR TAGSKPIANS VKYSSPTVAG
FSGGVMYAFG GVAGSVGADN AVSAGVNYEL GAFGVGAAYT NEKYGPAPGV PSTSVRNWGV
GMHYDFGVVT AKALMTTVRN SFNDAGVWMA EAGGLWRIRP DVVLGAKYMY MKGNEAVNDN
HAHQISVALQ YLLSKRTMVY VSADYQRANS GANAQVNGVL DPNGASSSAS QAVARMGLHT
VF
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