| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_3895 |
|---|
| Symbol | |
|---|
| ID | 6126728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010515 |
|---|
| Strand | + |
|---|
| Start bp | 820555 |
|---|
| End bp | 821529 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641651003 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001777536 |
|---|
| Protein GI | 170736276 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.155273 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCG CCCTTTCCCG CCATGCGCCG AACCGGCTCG GCACGCTACA GGCGCCCGAC
GAAGTCGAAC GCGCGGTCGC GCACCGGCTC GGGCCGCACC GGATGGCCGC GTCCGGCCGC
GATCCGTTTC ACGCGGAGCT GTACGAGGTG CCGCTGCATC ACGGCGCGCT GCTCGAACTC
TGCTACGGCC GCGCAACGCG CATCGAGTTC GGTGACGACG CCGATCACTT CCTGTTCCGG
CTGACGGTCG CCGGTGCGTG CGAACTGCAG GCCGGCAACG TCGTCGCGCG CGCCGGCCCC
GGCGCGCTGA CCGTATCGTC GCCCGCGCTT CCGAGCCGTC TGCGCACGAG CCCCGATTGC
CGCAACCTCG TGCTGCGGCT CGAACGCGGC GCGCTCGAGC GCAAGTTGCA GGACATGCTG
CAGGCGACGC TCACGCGGCC GCTGCAATTC GATCTCGCGG CCGGCGGTGC CGGCGCGGGC
GCCGCGCTCG TACGGCCGAC CTTCGAATAC CTGTGCCGGC TCGGCGCGCA GCCGGGCATC
GGCGCGGCGT CGCCGGTGTT CGGCGCCGAC CTCACCGCGT GGCTGATGTC GCTGCTGCTC
ACGCACCTGC CGCATTCGTA CAGCGACGCG CTGCGACGCG GCACGCCGCC GCTGCCTGCG
CACGTGCGCC GCGCGTGCGC TCACGTCGAT GCGCACCTCG GCGAACCGCT CGCGCTCGCC
GCGCTGGCGG CCATCGCCGG GGTTGCGCCG CGCACGCTGC AACATGCGTT CCGCGCATTC
CTGCACACGT CGCCAGCCGC GTACGTGCGC GAGCGCCGGC TCGCCGCCGT ACACGCGGCG
CTACAGCGCG GCGACGCGCG CAGCGTGACC GACGTATTGA TCGCGCACGG CATCCATGGC
TTCGGCCATT TCGCGAAGGC GTATGCACGG CGTTACGGCC ACGCGCCTTC CGTCACTGCG
AGGCAGACAC GATGA
|
|---|
| Protein sequence | MDIALSRHAP NRLGTLQAPD EVERAVAHRL GPHRMAASGR DPFHAELYEV PLHHGALLEL
CYGRATRIEF GDDADHFLFR LTVAGACELQ AGNVVARAGP GALTVSSPAL PSRLRTSPDC
RNLVLRLERG ALERKLQDML QATLTRPLQF DLAAGGAGAG AALVRPTFEY LCRLGAQPGI
GAASPVFGAD LTAWLMSLLL THLPHSYSDA LRRGTPPLPA HVRRACAHVD AHLGEPLALA
ALAAIAGVAP RTLQHAFRAF LHTSPAAYVR ERRLAAVHAA LQRGDARSVT DVLIAHGIHG
FGHFAKAYAR RYGHAPSVTA RQTR
|
|---|
| |