Gene Bcenmc03_3881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3881 
Symbol 
ID6126714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp804946 
End bp805419 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content64% 
IMG OID641650989 
Productnuclear transport factor 2 
Protein accessionYP_001777522 
Protein GI170736262 
COG category[S] Function unknown 
COG ID[COG4319] Ketosteroid isomerase homolog 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.601684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGGA TTCATCTTTG TACTGCTGCG CTTGCAGCGT GCGTGTCTTT TTTTGCACTC 
GCGGCGCCGG CTGTCGCCGG TGGTGCGCAA CGCCTGCCCG AAGCGGCGAT CAAGGCCGAA
AACGCACGGT GGGCGGATGC CTTTGCGCGA GGGGACTACG ACGCGATCGG CCGCCTCTAT
ACCGACGACG GCGCGCTCTT GCCGCCGGGC GGCGACAAGG TCACCGGGCG CCGCGCGATC
ACCGAGTACT TCACCAGCGG GTATGCCGGA TCGAAACCCG GCACCGTATC GTTCAGCAAT
GACGAGTTCT ACGGTAACGA CCGGGTCGTG ACGGAGGTAT CGGATGTGGA GGTTCGCGAC
GGTGACGGAA AGCTCAAGAT CCGCGCGAAG CAGACGCTCG TGTTCCTGAA GCAGGGCGGC
ACGTGGAAGC TGCATCGCGA CATGTGGAAC GCTTACCCGC CCGTCAAGGA CTGA
 
Protein sequence
MRRIHLCTAA LAACVSFFAL AAPAVAGGAQ RLPEAAIKAE NARWADAFAR GDYDAIGRLY 
TDDGALLPPG GDKVTGRRAI TEYFTSGYAG SKPGTVSFSN DEFYGNDRVV TEVSDVEVRD
GDGKLKIRAK QTLVFLKQGG TWKLHRDMWN AYPPVKD