Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3881 |
Symbol | |
ID | 6126714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | - |
Start bp | 804946 |
End bp | 805419 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641650989 |
Product | nuclear transport factor 2 |
Protein accession | YP_001777522 |
Protein GI | 170736262 |
COG category | [S] Function unknown |
COG ID | [COG4319] Ketosteroid isomerase homolog |
TIGRFAM ID | [TIGR02246] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.601684 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACGGA TTCATCTTTG TACTGCTGCG CTTGCAGCGT GCGTGTCTTT TTTTGCACTC GCGGCGCCGG CTGTCGCCGG TGGTGCGCAA CGCCTGCCCG AAGCGGCGAT CAAGGCCGAA AACGCACGGT GGGCGGATGC CTTTGCGCGA GGGGACTACG ACGCGATCGG CCGCCTCTAT ACCGACGACG GCGCGCTCTT GCCGCCGGGC GGCGACAAGG TCACCGGGCG CCGCGCGATC ACCGAGTACT TCACCAGCGG GTATGCCGGA TCGAAACCCG GCACCGTATC GTTCAGCAAT GACGAGTTCT ACGGTAACGA CCGGGTCGTG ACGGAGGTAT CGGATGTGGA GGTTCGCGAC GGTGACGGAA AGCTCAAGAT CCGCGCGAAG CAGACGCTCG TGTTCCTGAA GCAGGGCGGC ACGTGGAAGC TGCATCGCGA CATGTGGAAC GCTTACCCGC CCGTCAAGGA CTGA
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Protein sequence | MRRIHLCTAA LAACVSFFAL AAPAVAGGAQ RLPEAAIKAE NARWADAFAR GDYDAIGRLY TDDGALLPPG GDKVTGRRAI TEYFTSGYAG SKPGTVSFSN DEFYGNDRVV TEVSDVEVRD GDGKLKIRAK QTLVFLKQGG TWKLHRDMWN AYPPVKD
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