Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_3798 |
Symbol | |
ID | 6126631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010515 |
Strand | + |
Start bp | 712495 |
End bp | 713622 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641650905 |
Product | porin |
Protein accession | YP_001777439 |
Protein GI | 170736179 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0973702 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG CAGTCGTCGG TACCCTCTCG CTCGCCTTCG TCAGCGCCGT CGCGCATGCG CAAAGCAGCG TCACGCTCTA CGGGATGCTG GATGCCGGTA TCGCCTATAC GAACAACCAG TCAGGCAAAA GCGCGTGGCA GCAAGGCAGC GGCCTGCTGT CGAATACGGT CTTCGGGCTG AGCGGCAACG AGGATCTCGG CGGCGGCCTG CATGCGCTGT TCCGCCTCGA AAGCGGTTTC AACCTGAACA ACGGCACGCA GTCCTATCGA AACACGCTGT TTGGCCGCCG TGCGTACGTC GGCCTGCAGA GCGATCAATA TGGCACGCTG ACGCTCGGCC GCCAGTACGA TGCCGTGGTC GATTATCTCG GCCCGCTCGC GATGGCGAAC AACGGCGACG GCAACAACCT CGCGTCGCAT CCATTCGACA ACGACAACCT CGACGATTCG TTCTATATCG ACAACGCGGT GAAATACACG AGCCCGACGC TCGCCGGCTG GCAGTTCGGC GGCCTGTACG GGTTCGGCAA CGCGGCCGGC GGCTTCGCGA ACAATCGCGC ATACAGTGCG GGCGTGTCGT ATGCGAACGG GCCGGTCAGC GTCGGCGCCG CGTACCTGCA ACTCAATCGC GGCGGCTTGA CGACGGGCGG CGCACTGTCG GCGAACGACG CGCCGAACTT CCCGGCCGTG AGGCAGCGCG TGATGGGCGC CGGCGGCAGC TATGCGTTCG ACCGGCTGAC GATCGGCGCG GTGTGGACGC ACGCGATGTT CGACGAAACG GCCGCGTCGT CGCTGCCCGG CGCACTGAAT GCGCTGCGTT TCGACAACTA CGAGGTCAAC GCGCGCTATG CGCTGACGCC GGCGGTTTCG TTCACGGGCG CCTATACGTT CACCGACGGC CGCTACGACG ACGCAACCGG CAGCCACCGG CCGAAGTGGC ACCAGGCGAC GCTGATGGCC GACTACGCGC TGAGCAAGCG CACCGACGTG TATGCGGAAA CCGTGTACCA GCACGCGTTC GGCGTGCCAT CGGGCGCGAC GCTCGGGTTC GCGAACGTCA CGGGGCTCGC GGCTTCGTCG ACGCGTACGC AGGTGGTCGC AACGGTCGGC ATCCGGCATC GGTTCTGA
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Protein sequence | MKKAVVGTLS LAFVSAVAHA QSSVTLYGML DAGIAYTNNQ SGKSAWQQGS GLLSNTVFGL SGNEDLGGGL HALFRLESGF NLNNGTQSYR NTLFGRRAYV GLQSDQYGTL TLGRQYDAVV DYLGPLAMAN NGDGNNLASH PFDNDNLDDS FYIDNAVKYT SPTLAGWQFG GLYGFGNAAG GFANNRAYSA GVSYANGPVS VGAAYLQLNR GGLTTGGALS ANDAPNFPAV RQRVMGAGGS YAFDRLTIGA VWTHAMFDET AASSLPGALN ALRFDNYEVN ARYALTPAVS FTGAYTFTDG RYDDATGSHR PKWHQATLMA DYALSKRTDV YAETVYQHAF GVPSGATLGF ANVTGLAASS TRTQVVATVG IRHRF
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