Gene Bcenmc03_3692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_3692 
Symbol 
ID6126526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp594161 
End bp595600 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content73% 
IMG OID641650800 
Productmajor facilitator transporter 
Protein accessionYP_001777334 
Protein GI170736074 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.378275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.439407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACGA CCACACCGTC CCCCGCTTTC CCGCCCGCGC TGGCGCGCAT CGTCGCCACC 
GTCAGCATCG GGTTCGTCGT CACGCAGCTC GACGTGACCA TCGTCAATAT CGCACTCGCG
CATCTCGCCG CCGATCTGCA CCTGCCGGTG GCCGGCCTGC AATGGGTCGT CGATGCGTAC
ACGCTCGCGT TCGCGGTGCT GATGCTGTCG GCCGGCGCGC TCGGCGACCG CTTCGGCACA
CGCCGCCTGT ATGTCGCGGG CCTCCTGCTG TTCGCGTTCG CGTCGCTCGC GTGCGGCGCC
GCCGTCGCGC CCGCGATGCT GATCGCGGCC CGCGCGCTGC AAGGCGTCGG CGCCGCGGCC
ATGCTGCCCA ATTCGCTCGC GCTGCTCAAC GACGCGTGCC GGCATGACCC GCGCCTGCGC
GCCCGTGCGG TCAGCGGGTG GACGGCGGCC GGGTCGATCG CGATCGCGGC CGGCCCGGTC
GTCGGCGGCC TGCTGATCGC CGCGTGGGGC TGGCGCGGCA TCTTCCTCGT GAACCTGCCG
CTGTGTGCGG CGGGGCTCGC CGCCACGTTC GCGTGGGTGC CGGCGCGCCG CGAGCAGGCT
GCCCCGGCGC GCTCGACCCG TTCGCTCGAT CCGCGCGGCC AGTTCATCGC GATCGCGATG
CTGACCGTGC TGACCGGCGC CGTGATCGAA TGGCGGCCGC TCGGCTTCAC GCATCCCGTC
GTGGCCGGCG GTTTCGTGCT GGCGGCGCTG GCCGCGCTCG CGTTCGTCGC GGTCGAATCG
CGTACGGCCA CGCCGATGCT GCCGCTGTCG CTGTTCCGCC ACCCTGCGTT CAGCACGGCC
GTGCTGTTCG GGATCTGCGT GAACCTCACG TACTACGGCA CCGTGTTCGT GCTCGCGCTG
TACCTGCAAC GCGCACGCGG CGAATCGGCG TTGCAGGCCG GGCTCGCGTT CCTGCCGCTC
ACCGGCGGCT TCCTGCTGTC GAATCTCGCG AGCGGACGCG TCGTCGCCCG CCACGGCCCG
CGCGTGCCGA TGGTGGCCGG CGCGCTCGTC GCCGCGCTCG GCTACGGGTC GCTGCATTTC
GTCGATGCCG CGACGCCGCT CGGCGTGCTG CTGGTGCCGT TCCTGCTGAT TCCGTCGGGC
ATGGGCTTCG CGGTGCCCGC GATGACGACG GCCGTACTCG CCTCGGTCGC GCCCGAGCGG
GCCGGCATCG CGTCGGCCGT GCTCAATACC GCGCGGCAGG CCGGCGGCGC GATCGGCGTC
GCGGCGTTCG GTGCGCTCGC CGGCGGCGGC GGTGCAGCGC AGGTCGTCAG CGGGTTGCGG
ATCGAAACCG TCGTGTCGGT CGCGCTGCTG GTCGCGGCCG CGCTGCTCGC GACCCGCGTG
CGGACCGATG CGGATCGCGG TGCGCCGCGG TCGCGTCAGA CCTTGTCGGC GCACGATTGA
 
Protein sequence
MDTTTPSPAF PPALARIVAT VSIGFVVTQL DVTIVNIALA HLAADLHLPV AGLQWVVDAY 
TLAFAVLMLS AGALGDRFGT RRLYVAGLLL FAFASLACGA AVAPAMLIAA RALQGVGAAA
MLPNSLALLN DACRHDPRLR ARAVSGWTAA GSIAIAAGPV VGGLLIAAWG WRGIFLVNLP
LCAAGLAATF AWVPARREQA APARSTRSLD PRGQFIAIAM LTVLTGAVIE WRPLGFTHPV
VAGGFVLAAL AALAFVAVES RTATPMLPLS LFRHPAFSTA VLFGICVNLT YYGTVFVLAL
YLQRARGESA LQAGLAFLPL TGGFLLSNLA SGRVVARHGP RVPMVAGALV AALGYGSLHF
VDAATPLGVL LVPFLLIPSG MGFAVPAMTT AVLASVAPER AGIASAVLNT ARQAGGAIGV
AAFGALAGGG GAAQVVSGLR IETVVSVALL VAAALLATRV RTDADRGAPR SRQTLSAHD