| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2261 |
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| Symbol | |
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| ID | 6120024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 2397121 |
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| End bp | 2399727 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641650200 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001776740 |
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| Protein GI | 170731307 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.342562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAACC ACACCATAAA GCTAGCATTC TGTATCTCAT CCGTACTTTA TTGTTCCACT
TCAGCAACGG CAGCCCCCAA CACTGACGCC GTCACCAAGC TGGATACCGT TACTATCACT
GGCTACCGCG CCTCACTGGA AAAAACACAG TCCATCAAGC ACGCCGCCAA TTCGATCGTG
GATGCGATCA GTGCCGAAGA CATCGGTAAA TTTCCCGACA GCAACGCTGC CGAATCACTC
TCCCACCTAC CAGGCATCAG CGTAGACCGC CAATTCGGTG AAGGCGAAAA AATTAGTATC
AACGGCACCG ACCCTGCCCT GAACCGCGTC TTGCTCAACG GCCAAACCAT TGCCTCCGGC
GACTGGGGCG GCAACCCAAC CGACACCAGT GGACGCACCT TCAATTACAG CCTGCTGTCT
CCGGAAATCA TCGGACTGAT GGAAGTGTAT AAAACACCGG AAGCACGCAT CGACGAAGGA
TCGATCGGCG GCACCGTGAT CGTACATACA CGTCAACCGT TAGACCTGCC GAAAAACACC
ATACGCGGCT CGATCGGCTA CAGCTACAAC GACCGCTCCC AAAAAAGCAA CCCACGCGGC
TCGATCCTAT GGAGTTGGAA AAACGACAGT GAGAACTTTG GCGCATTGAT CTCAGCCACC
CACGACAAAC AGGACATTGC ACGCGCCGGC ATCGAATTCT TCGGCTATAC CACCGGCGCG
AATATCCCCC CTGAGGCCAC CATCACTGGC GACGGCAGCA CTCCAACCAC CGCAAAAGTA
CCGGCTGGCA TTAACAGCGC ATTCTTCCAA CAAACCCGCG AACGTAACGG ACTCCAAGGC
GCACTCCAGT GGAAACCGAA CGAACAGAAC GAATTCAACC TCACCGGCAT CTACATCAAA
GGCAAATACA ATAATTTCAG CGAATCACGC TATATCTGCC CCGTCTGCAA CAACGACTTA
AACAAAGCCT CTGCAGCCAA CGTACAAAAC GGCTACATCA CCACAGCGAC TGTCTCCGAT
GGAACAGCAG GACAACCTTA CGCACAGCTT GATGCGAATT ACCGTATAAG CACAGTCACC
ACAAACAGCT TGAATCTGCA CCATCAATGG TCAGGAGACA AATGGGTACT CACCACCCAG
ACCGGGACGA CAAAAGCCAC TGGCGGAAAA GATCCCGAAT ACTTAATGAA ATTTCTGCTC
CAAGAAGGCG GCTATCGCTT CAATTACGAC GGCACCCATA CCGGCGTAAC TTACGATAAC
AACAACGCAT CCAACTGGGC CCTAAAGAGC GGCGAACAAG CGGGCGGCCT TGAATACACT
CGGACCAACG ACCAAGAAAA TTACTTCCAG TTCGACGCCA CACGCGACCT CCATTGGGGT
CCCTTCAACA AACTGCAATT CGGCTACAAA TACATCGGCC ATAAGAACGG CCAAACCTCC
CGTGGTAACG CACTGTTTGC TAACCAAGAC ATCCTATTAA CAGCCTTCAA TCCTGGCATG
ACACCCACAG GACTGTACAA CGGACTGGGA GCAAGCGGCG ACCTCATCAA CTGGCCAACC
GCCGACCTTC GCTCGGTCCT GTCCTATCTC AACGCATTGC CTGAAGCGGC CTTCGAAACC
AAATACAACC AACAATTCAG CGTGACAGAA ACCACCAATA ACCTGTACAC ACAGTTGGAT
TTCGATTCTG GAAAATGGCG CGGTAACCTC GGCATCCGTT ACGTGGACAC CAAAGACAAC
ATCTTGTATT GGCAAAGCAC CACCGTAAAC GACACCGTCA ACTATCAACC GGTAAAAGAC
TCCAAACGCT ATTACAAGCC ACTACCGAGC CTCAACATTG CCTATGACCT GACCAACAAC
AGCGTCCTGC GTTTCTCCGC CGCTCGCGTC ATCGCCCGGC CACGTTACGG TGACCTTGCC
GGCTCCTTTT CACTGAACAG CACCTCTGGC GACCTGACTG CAAGCGGCGG CAACCCCAAC
CTGAAACCCT ACCAATCCAG CAACTACGAC CTAGCCGCTG AATGGTACTT TGCCCCCTCA
AGCATGCTGT CAGCGGAAGC GTTTTACCGT GACATCAGCT CCTACATCGT CACCACGACC
ACAACCGAAA CCCTGAGCGA CCCATCAAAC AATATCTTCA ACAAACCCTA CACCGTCACC
CGACCGATGA ATGCCACCGG CGCCAAAGTG ACCGGTCTTT CACTGAACTA CCAACACGCA
TTCGCCTACG GCTTTGGTCT GGCCACAAAC TACACCTATG CGCAATCCAA CTCTAACGAT
GGCCTGAACC TACCCTACCT CTCCAAAAAC ACCTACAACG TGATCCCCTA TTGGGAAAAG
GGCCCCTGGG CAGTCCGCCT TAACTACAGC TACCGATCAA AATACTTCAC CCAAATCGGA
CGACTGGATT CGCAGGTCTT CACAGATGCT TACAAAGAAC TCGACCTGAC CACATCCTAC
AAATTTAACG ACTGGGTCAC CCTAAACATC AGCGCCACCA ACCTGCTGAA TTCAACCTAC
TACTGGTACA ACGAAGTTAA ATACGCCCCC ATCGGCATGT ACAAAAATGG CCGTAGCTAC
CAAGCACAAC TGAACTTCAA ATTCTAA
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| Protein sequence | MYNHTIKLAF CISSVLYCST SATAAPNTDA VTKLDTVTIT GYRASLEKTQ SIKHAANSIV
DAISAEDIGK FPDSNAAESL SHLPGISVDR QFGEGEKISI NGTDPALNRV LLNGQTIASG
DWGGNPTDTS GRTFNYSLLS PEIIGLMEVY KTPEARIDEG SIGGTVIVHT RQPLDLPKNT
IRGSIGYSYN DRSQKSNPRG SILWSWKNDS ENFGALISAT HDKQDIARAG IEFFGYTTGA
NIPPEATITG DGSTPTTAKV PAGINSAFFQ QTRERNGLQG ALQWKPNEQN EFNLTGIYIK
GKYNNFSESR YICPVCNNDL NKASAANVQN GYITTATVSD GTAGQPYAQL DANYRISTVT
TNSLNLHHQW SGDKWVLTTQ TGTTKATGGK DPEYLMKFLL QEGGYRFNYD GTHTGVTYDN
NNASNWALKS GEQAGGLEYT RTNDQENYFQ FDATRDLHWG PFNKLQFGYK YIGHKNGQTS
RGNALFANQD ILLTAFNPGM TPTGLYNGLG ASGDLINWPT ADLRSVLSYL NALPEAAFET
KYNQQFSVTE TTNNLYTQLD FDSGKWRGNL GIRYVDTKDN ILYWQSTTVN DTVNYQPVKD
SKRYYKPLPS LNIAYDLTNN SVLRFSAARV IARPRYGDLA GSFSLNSTSG DLTASGGNPN
LKPYQSSNYD LAAEWYFAPS SMLSAEAFYR DISSYIVTTT TTETLSDPSN NIFNKPYTVT
RPMNATGAKV TGLSLNYQHA FAYGFGLATN YTYAQSNSND GLNLPYLSKN TYNVIPYWEK
GPWAVRLNYS YRSKYFTQIG RLDSQVFTDA YKELDLTTSY KFNDWVTLNI SATNLLNSTY
YWYNEVKYAP IGMYKNGRSY QAQLNFKF
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