Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_2164 |
Symbol | |
ID | 6120135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 2272158 |
End bp | 2273864 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641650102 |
Product | protease |
Protein accession | YP_001776647 |
Protein GI | 170731214 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCGCA TGTCGAAGGT GGCGGTTGCA ACATTTAAAC TGGTGACCTC GCCAGAATTT CGCGACAGGA GCTTCACTTT GCGCCGACTA TCACTTGCTA TTGCCACTGC TCTCGTATTG CCTCTGGGTG GTATTGGTCT CAATGCTCAG GAAAGCCGCT TACCTGACAT TGGTTCCTCG GCGGGGCAAT TACTGACTCC GGCACGTCAG GCCGAATATG GCAAGTTGAT GATGGCTGAG TTACGTAACT ACGGCTATGT GTTGGAAGAC CCGTTACTAC AGGGGTGGTT GCAGAGCATA GGAGAACATT TGGCGGCCAA CAGTGATCAA CCGCACCAAC TATTTACCTT TGTATTGTTA AAAGAACGTC AAATTAATGC GTTTGCCACA TTGGGCGGTT ATGTAGCGGT GAATTCCGGC CTGTTGCTGA CCGCTGAGCG TGAGGATGAG GTTGCAGCGG TGCTCTCCCA CGAGATCATG CACATTAATC AGAAGCATGT GCTGCGTAGC GTTGAGCGTG CACAGCGTGA TCAGATTCCG ATTCTGCTAG GGATGCTGGC GGCTGTGATC GCCGCGCAGC ACGTTGGCGG TAATTCAAGT GGTGATGCGA CGATGGCTGG TATTACCAGT GCCATGGGAC TCATGCAGCA GCGCCAGATC AATTACACCC GTTCCAACGA AGCTGAAGCT GATCGTCTTG GAATTCACAC CTTGGCGCGT AGTGGGTATG ACTTAGAGGC GATGGCTGGC TTTTTTGAGA GAATGTCGCT GGTGACACGC GGTAATTCTG GTGGTGACCA GGCACCGGAC TATTTACAGA CCCATCCTGT GACCGTGACC CGCATCAGCG AGGCGAAGGC ACGTGCCGAG CAACTCAAGA AACAAAAGGG ACTCACGGGG GGCGAGGTTG ACCTAATGTC CCGGGAGCGT TTGAATTTGC ATCATGTTTT TCCTGGTGTT CCTGCTAATC CGTTGTTGCC AAAAGTTCTA CAGCCAGCGT ATAGCGAGTT ATCTCGTGGG CCTAGTGGTC AGTTCGGTTG GGCCAAAGAG CGCTTACGCG TACTGAGTGC GAAATCCCCA GAGAGTGCGC TGCGTGAGTA TGAAGCCCTG CGTCGCAACA CAAAGGGGGG ATTGAATGAT TTTCAGCGCT ATGGGATGGC GTTGGCCAAG TTCCGTAATG GCAGCAATCT GGACGAGGTC ATGCATGAAT TCCGTACATT GCTTGAGGTA CACCCTAACA ATGTCTGGCT TGCTTCGGCA TTGGCGCAGA CCCAAGCGCG GGCTGGACAG CGTCACGAGG CTGGTGAACG TTTCGATGCC TTGTTGCGGC GCTTGTCTGG GCAGCGTGCA GTGGTGCTCA TGTATGCGGA GATGCTTAAC GAAGGCGGTA ACCTTCAGGA TGGTAAGCGT GCTCAGGCGT TGTTATTGCC GTTACTGCGT CAGTTGTCTG AGGATGCGTT ATTTCAACAA ACCTTCGCGC GCTCCTGCGA GTTGGCCGGT GCCACTGCAC GCGCCAGTGA GGCCTATGCG GAAGCCGCGT TTCTGAACGG ACGTCCGGAG CAGGCATTGA TTCAGTTGCA GGCGTTGAAG AAGGAGAATC TGGATTATGT GACACGTGCG CGAGTGGATG CGCGTATTGC GGCGATTACT CCAGCGGTGC TGGAAATGCG TCGTCAGGGT ATCCGCGATC CGGATTTGGA TCGATGA
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Protein sequence | MPRMSKVAVA TFKLVTSPEF RDRSFTLRRL SLAIATALVL PLGGIGLNAQ ESRLPDIGSS AGQLLTPARQ AEYGKLMMAE LRNYGYVLED PLLQGWLQSI GEHLAANSDQ PHQLFTFVLL KERQINAFAT LGGYVAVNSG LLLTAEREDE VAAVLSHEIM HINQKHVLRS VERAQRDQIP ILLGMLAAVI AAQHVGGNSS GDATMAGITS AMGLMQQRQI NYTRSNEAEA DRLGIHTLAR SGYDLEAMAG FFERMSLVTR GNSGGDQAPD YLQTHPVTVT RISEAKARAE QLKKQKGLTG GEVDLMSRER LNLHHVFPGV PANPLLPKVL QPAYSELSRG PSGQFGWAKE RLRVLSAKSP ESALREYEAL RRNTKGGLND FQRYGMALAK FRNGSNLDEV MHEFRTLLEV HPNNVWLASA LAQTQARAGQ RHEAGERFDA LLRRLSGQRA VVLMYAEMLN EGGNLQDGKR AQALLLPLLR QLSEDALFQQ TFARSCELAG ATARASEAYA EAAFLNGRPE QALIQLQALK KENLDYVTRA RVDARIAAIT PAVLEMRRQG IRDPDLDR
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