| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2067 |
|---|
| Symbol | |
|---|
| ID | 6120271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 2168421 |
|---|
| End bp | 2169401 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641650016 |
|---|
| Product | acyltransferase |
|---|
| Protein accession | YP_001776563 |
|---|
| Protein GI | 170731130 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4261] Predicted acyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACAT TTTGGAAAAA TCGTCCAGAG GGTGGGAGGC GTTTCGCGCT GTGGCTGATT
CGCGGTATTG CTCGGTATGG CGGTCGGTTG ATCGGTCGCG CACTGTTGTA TCCGATCACG
GTCTACTTTC TTGTGGTGCG TGGCGCGGAA CGTCGCGCTT CTGTGTGTTA TCTGAGCCGT
GTGTTAGGTC GGCCAGCGTG TTGGTTGGAT GTTGCTAGAC ACTTCCATAT GTTTGCTTCC
ACGATTCTCG ACCGTGTCTA TCTGTTGTGT GGGCAGATGG AGCGTTTCCG GATTGACTTG
TGTGGTGTGG AGCAGTTGTC TGTTTATCTG GACCGTGGCT GTGGTCTGCT GATCTTCGGT
TCGCACTTGG GCAGTTTTGA AGCGTTGCGT GCGCTGGCGA GGACGCATCC GCATGCGAAA
CTACGGATCG TGCTGGACAA GGCACACAAT CGTGTCACGA GTGAGCTGCT GGATGCACTC
AATCCGGCCC TTGCTGAGGG CATCATTGAT GCTGGTATGG ACAGTACTGC AATTGTCATC
GCGATTAAGA CGGCAGTTGA GGAGGGAGCA ATGGTTGCGT TGCTTGTGGA CCGTGCCTCT
CAGCGGGATA CCTTACTGCC GATGATGTTC CTGGGGGGCA CCGCAGGGTT TCCCACGTCG
CCGTGGTTGA TTGCTGCGGT TTTGAAGGTA CCGGTAGTGC TGGCATTCGG TTTGTACCAC
GGTAGTAACC ATTATGAGTT GATATTCGAG GCGTTCAGCG AAGGCCTGGA TGTGCCGCGT
CGTCAGCGTG CGCCGGTATT GGCGGCGCTC ATCGGTGATT ACACGGCCAG GTTGGAGCGT
TACACACGTT ACGCGCCATA CAACTGGTTC AACTTCTACG ATTTCTGGAA TATCTCTGAG
GCTGATGATG CGTCGTATCT TGGTGTGGAT GTTGATATTG CTGTGCAGCG TCGTACCGTC
GCTGGTTACC GCAGCAAATG A
|
|---|
| Protein sequence | MSTFWKNRPE GGRRFALWLI RGIARYGGRL IGRALLYPIT VYFLVVRGAE RRASVCYLSR
VLGRPACWLD VARHFHMFAS TILDRVYLLC GQMERFRIDL CGVEQLSVYL DRGCGLLIFG
SHLGSFEALR ALARTHPHAK LRIVLDKAHN RVTSELLDAL NPALAEGIID AGMDSTAIVI
AIKTAVEEGA MVALLVDRAS QRDTLLPMMF LGGTAGFPTS PWLIAAVLKV PVVLAFGLYH
GSNHYELIFE AFSEGLDVPR RQRAPVLAAL IGDYTARLER YTRYAPYNWF NFYDFWNISE
ADDASYLGVD VDIAVQRRTV AGYRSK
|
|---|
| |