| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1890 |
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| Symbol | |
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| ID | 6120169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1972109 |
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| End bp | 1973116 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641649849 |
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| Product | transposase OrfB |
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| Protein accession | YP_001776399 |
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| Protein GI | 170730966 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGATGG CCCACCGTAT TGCACTGGAC CCTAACAATG TGCAGGCGAC CCACCTGTCG
CGTGTGGCAG GTGTGGCCCG TTTTGCCTAT AACTGGGCGT TAGCCGAATG GAGGCATCAA
TATGAAGCAT GTACGTTGGA CAGTGCCCTT CCCAAGCCAT CGCAACATTC CTTGCGGCGG
CAACTGAACG CGATCAAGCG CGAGCAGTTT CCATGGATGG GCGAAGTCAC CAAGAACGCG
CCTCAAATGG CGATCATCCA GTTGGGGCAG GCGTTTCAGA ACTTCTTCAC AGGTCGTGCC
AAGTATCCGA AGTTCCGTAA AAAGGGCGCG CATGACCGAT TCACGCTGAC CAATGACCAG
TTTGACCTTA ACGCTTCACG CATTCGCATT CCTCGGCTGG GCTGGGTGCG CATGCGTGAG
ACGTTGCGCT TTGCCGGCAG AATCATGTCG GCCACCGTGT CGCGTGTGGC TGCACGTTGG
TTTGTTAGCA TCACCGTGGA CGTGCCCGAT CCATCACATC TACCTCAAGC TGAAAACCAA
GGCGCGGTGG GTGTTGATCT GGGTGTGTTG GCGCTGGCAA CGCTCTCAAC CGGAGAAACA
ATCTGTGGCC CCAGGCCCCA CAGGGCACTG CTGGGTCGCG TGCGCAGGCT TTCACGCAGT
GTGTCGCGTA AAGTCAAAGA TTCTGCCAAT CGTCACAAAG CCAAAGCCAC ATTGGCGCAT
CTACATGCAC GGATTGCAGC AATTCGCTTA GATGCACTGC ACAAACTCAC CAGCGATCTT
ACCCGGCGCT TTCACACCAT TGGCATTGAG AACCTGAATG TCAAAGGCAT GGTTAAGAAT
CGCCATTTGG CACGTTCCAT CGCCGATATG GGCTTTTTTG AATTCAGGCG GCAGCTTGAA
TATAAGGCGG CGATGCGTGG TGGGCAGGTT GTGGTGGCTG ATCGTTTCTT TGCCAGTAGC
AAGATGTGCT CGACGTGTGG GCACACGCTC AATGAGTTGC CCCCTTAA
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| Protein sequence | MLMAHRIALD PNNVQATHLS RVAGVARFAY NWALAEWRHQ YEACTLDSAL PKPSQHSLRR
QLNAIKREQF PWMGEVTKNA PQMAIIQLGQ AFQNFFTGRA KYPKFRKKGA HDRFTLTNDQ
FDLNASRIRI PRLGWVRMRE TLRFAGRIMS ATVSRVAARW FVSITVDVPD PSHLPQAENQ
GAVGVDLGVL ALATLSTGET ICGPRPHRAL LGRVRRLSRS VSRKVKDSAN RHKAKATLAH
LHARIAAIRL DALHKLTSDL TRRFHTIGIE NLNVKGMVKN RHLARSIADM GFFEFRRQLE
YKAAMRGGQV VVADRFFASS KMCSTCGHTL NELPP
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