| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1880 |
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| Symbol | |
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| ID | 6121601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1961982 |
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| End bp | 1963109 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641649840 |
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| Product | outer membrane protein |
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| Protein accession | YP_001776390 |
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| Protein GI | 170730957 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000687097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA AAATCCTTAC TGCTGCGCTG CTGGGTGGTA TAGCTATCAT CCAAGTTGCT
TCTGCACAGG AATTCGATGA CCGGTGGTAT CTCGCTGGTT CCACCGGGTT TAACTTCCAA
GATAAGCGTC GTCTTACTAA CGATGCTCCT TTTTTCGCTC TTGGAATTGG TAAGTTCATC
AATCCAGTTT GGTCGATCGA CGGCACACTG AACTATCAGA ACCCGCAGTT CAAAAGCAAC
AAAGATCTAA ACTGGAGCCA ATATGGCTTC TCTGTCGATT TTCGTCGCCA TTTCATCCAG
GATAACCGCG GCTGGAATCC TTACTTGTTG TTAGGAGCGG GGTACCAACG TTCAGAGGAG
GAATTTGATA ACACCCCAAA CGTAAATTCC CCTGGCGAAC GTAAGAAAGG CGGCTTTGCT
GCTAAGGTAG GCGCTGGCTT GCAAACAACA TTCAGAAGCC GTGTCGCCGT CCGTGCTGAA
GTAGCTTATC GTGGTGACCA TGATAAGGAT AGCGTGCGTC AGCCGGTGGC TGGTGTTGCG
GCACCTTCGA GCAAGAAATG GTTTGGTGAT ACCTTGGCTT CAATTGGTGT CGTGATCCCA
TTTGGTCCAG CCGCTTCCTC ACCAACGCCA CCACCTGCTC CGCCAGCTCC AACACCGCCA
CCGCCACCGC CTGCTCCAAG CTGTGCTGAA TTGGATAGCG ATGGAGATGG AGTCAACGAC
TGTGACGACA AGTGCCCGAA CTCACAACCA GGCCAGACGA TCGGACCAGA TGGATGTCCG
GTGCCAGTGT CGATTGACTT AAAAGGCGTA AACTTCGATT TTGACAAGTC TAAGCTTCGT
CCTGACGCTG TTGCGGTTCT TAAGGAGGCT ACCGAAATCT TGAGACGCTA CCCTGACTTG
CACGTAGAGG TGGCTGGCCA TACCGATTCG ACAGGTCCGG CTGCTTATAA CAAAAAGCTA
TCGGAACGTC GCGCTAAAGT CGTGTATGAC TACCTGCGTA ACAATGGTAT CGACGCATCT
CGCCTGATTG GGCCAGTCGG ATATGGGGAG ACCCATCCAA TTGATACAAA CAAAACCCCA
GCAGGTCGTG CGAAGAACCG CCGTACTGAG TTGAACGTTC AGAATTGA
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| Protein sequence | MKKKILTAAL LGGIAIIQVA SAQEFDDRWY LAGSTGFNFQ DKRRLTNDAP FFALGIGKFI
NPVWSIDGTL NYQNPQFKSN KDLNWSQYGF SVDFRRHFIQ DNRGWNPYLL LGAGYQRSEE
EFDNTPNVNS PGERKKGGFA AKVGAGLQTT FRSRVAVRAE VAYRGDHDKD SVRQPVAGVA
APSSKKWFGD TLASIGVVIP FGPAASSPTP PPAPPAPTPP PPPPAPSCAE LDSDGDGVND
CDDKCPNSQP GQTIGPDGCP VPVSIDLKGV NFDFDKSKLR PDAVAVLKEA TEILRRYPDL
HVEVAGHTDS TGPAAYNKKL SERRAKVVYD YLRNNGIDAS RLIGPVGYGE THPIDTNKTP
AGRAKNRRTE LNVQN
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