Gene Xfasm12_1768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1768 
Symbol 
ID6121006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand- 
Start bp1835237 
End bp1835719 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content51% 
IMG OID641649740 
Productputative type IV pilus assembly protein PilV 
Protein accessionYP_001776292 
Protein GI170730859 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4967] Tfp pilus assembly protein PilV 
TIGRFAM ID[TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT GTTCCAATCA TCGTTGCCAT TGGGCTGCGC CTCCCCTTGG GGTGTCGTTG 
ATTGAGGTGT TGATCGCGTT GCTGGTTCTG GGCATCGGTT TGTTGGCTTT CGCACTGCTT 
CAAACCATGA ATGTGCGTTT CACTAAAAGT GCCCAGCAGC GAACGATCGC CAGTAACTTA 
GCTTACGAGT TGCTAGACAT CATGCGTAGC CAGCGCAGTA CGGTGGGTTA CTACGGTGCG 
ATCACTTATG GAAGTTTTGA TGGTGTTGAT GGCACCGACT GCAATCATTC TGAAAATGCT 
ACGCCGGTTG CCAACATGGC GCGTTGGCGT TGTGAGGTGG TGAGTGCACT GCCAGATGGC 
CGTGCACAGG TGAATCTTGC GACGAATGGG GAAGTGACGG TGACGATCCG TTGGGGTGAT 
CAACACTGGG AGACCGATGT GAATAAGCAA TCCACCACTT TCAATCTGAC TAGTGTGTTA 
TGA
 
Protein sequence
MKKCSNHRCH WAAPPLGVSL IEVLIALLVL GIGLLAFALL QTMNVRFTKS AQQRTIASNL 
AYELLDIMRS QRSTVGYYGA ITYGSFDGVD GTDCNHSENA TPVANMARWR CEVVSALPDG 
RAQVNLATNG EVTVTIRWGD QHWETDVNKQ STTFNLTSVL