| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1765 |
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| Symbol | |
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| ID | 6121003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1828921 |
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| End bp | 1833486 |
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| Gene Length | 4566 bp |
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| Protein Length | 1521 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641649737 |
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| Product | fimbrial assembly protein |
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| Protein accession | YP_001776289 |
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| Protein GI | 170730856 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.143841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA ACGTTCTGAA GTGCGTCTTG CTTTGCGTCA TGTTCATCGG TCTTTGTTTT
CTCGTGCGGC GTGGTATCAC GGGGCCTGGC CCATTGGATA TTGCACAGGC GCCGTTGTTC
ACGAGTAATG TGGTGCCGCC GCTCAATATG CTGGTGATGG GGCGTGATCA CAAGTTGTAC
TACGAGGCCT ACAACGATGC GTCCGATTTG GACGGTGACG GTGTGCTGGA TGTCGGTTAC
AAGCCAGATA AGATCACGTA TTACGGTTAT TACAATTCGA ATGTGTGTTA TCGCGCGAAC
GGGACTATGT TTCAGGCGAT GTCCGTTGCC AATGGGAGTA ACGGAAAAAA ATGCACGGGT
GCTTGGAGCG GTGATTTTCT GAATTATTTA ACCACATCGC GTATGGATGC TTTGCGCAAG
GTATTGTTTG GTGGTTATCG CGAAGTCGAC ACGCTGACGC AGACTATTTT GCGTGCTTCA
TATACTCCAC AGGACGCGCA TAGTTGGGGC AAGGAGTACG CTAGTGTGTC GCATGACGGG
TATGACATCT CTGATTATGC GCCGCTGAGT GCGCCTGGGA GCGGCCATTA CCATTTGTTT
GCTGTGACGA CGCTCAGTGA TAATGGCATT CCACAATTAC GTGTACTTGC CGATACAACC
TTCCGTGTTT GGAATTGGGT GTCTATTGAG CGGCCGGTTG CTGGTAGTGA TTGCTTTACT
CCTGAGAATA AGCGCGTCAG CTGTGTGAGT GGGGGTTCTA CGGGTATTAG TGATTACCCG
TTACGGGTCG AGGTATGTTC TGTTGCCGAT GAGTTACGTG AAAGTAACTG TAAGCTTTAT
CAGAACAATA CTTCCTATAA ACCGACTGGA ATCCTGCACG ATTATGGGGA GAATGACCGT
ATGTACTTCG GTCTGTTGAC TGGCTCATAC CAGAAAAATA TTACTGGTGG TGTCCTGCAC
AGCAATGTAT CCAATTTTTC TCGAGAGATT AATCCGTTGA CTGGGCAGTT TTGCTTGAAT
GGCAATTGCG GCAGTGGGGG AGACGTGAAA GGGATTGTGC ATACGATTAG TAGTTTCCGT
ATGCTGGATT TCAACTATAA GGACTATACG TATGGGTGTG GGTGGATCGC GACGCGCCCG
GTGAAAGAGG GTGAGTGCTG GATGTGGGGC AACCCCATCG CTGAGATGAT GTACGAAACG
TTACGTTATT TTAGTGGAGC GACTGCCCCA CGCCATGAGT ACGATATTAA TAACAGCTCG
CAGGATATTG CTACGTTGCA ACTGTCCCAT CCCGGTTGGA AGCCGCCGTA TACCTCTGTC
GATCAGGGAG GCAGTGGCTA TTCGGTGTGC GCGCAGCCGA CAATGACAGT ATTTAGTGAT
ATCAACCCTT CTTACGATGA CAAGTTGCCG GGGTCTCACT GGTCCAATTT CAGTGGATCA
GGTGATCCTG CTTCGATGCG CAATTTGGAT GTTTCTGCGG AGGCTGATCG GATCTGGGAG
GCTGAAGGCG GCGGCAGCAA GTTATTTTTT ATCGGGGAAT CCAACAATAA TTCCGATAAT
GCACCGACAC CGAAAGTGGT GAGTAACTTA TCCACGGTGC GTGGGTTGTC TCCCGAAGAA
CCCAGCAAGG GCGGAACTTA TTATTCTGCT GCTGTTGCAC GCTATGGGGC TAATCACAAG
ATGGGCGGCA GTAAATTCGT ACGCACCTAT GCGGTTGCAC TGGCTTCGCC GCTTCCAAAA
TTTGAGTTCC CAGTTGGTAA TGCTCGAGTG AGTCTGGTGC CGTTTGCTAA ATCTGTGCGT
GGTTTCGGTA TCTCTGCGAC TAGCAATTTC CAGCCTACTA ACCAGATCAT TGATTTCTAT
GTGCAGCGTG TGGCCAATAT GGCTGGATCT TCTGGGGCGG ATTACGATGC AACCATCAAT
GGTGGCCGCC CCTATGCAGA GTTCCGTATC AATTACGAGG ATGTGGAACA GGGGGCTGAC
CATGACATGG ATGCAATCGC GTTTTACACG ATTTATGTCA ATGCCAAGAA TCAACTGGTG
GTGACACTCA AATCCGAATA TTCTGCTGGC AGCGTTGATC AGCATATGGG ATATGTGATC
TCTGGTACCA CACGCGACGG TGTGTATTTG GAAATATGTG ATCTTGCTGA TGGTCACAGT
AATGATGGGA CGCGCAGTAG TTGTGCAGGA CAACAGCCCT ACAAACTGAA TACTCCCCCT
AATCGCTTGC CTGGATATTG CAATGCGACC CCGATGCCTG GGGATTGTAA TGGCTTGCCC
CCTGTTGCAA CGCGAATATT CTCTGTGGCT TCTCAAGGTG CAAATGCGGT CTTGTTAAAA
GATCCACTCT GGTATGCGGC CAAGTACGGT CATGATCAGG GAGTGATACT CAATAGTAGT
GGTGGTCTGG CCAACTATTT CCCGGTGAAC AATGCGCTTT ATTTGCGTCA GCAGGTGGCC
AAAGCTTTTT CGGCCATCCA GAGTCAGGCG GGGAGCAGTG GTTCGATTGC CGTCGTTGGA
GCCAGTGTTT CCAGTACCTC GTTCGCGGTG ATCCCCAGTT ATTCCAGCAC CCATGATGGT
AAGGATTGGA CGGGTGAGAT GACCGCTTAT CGTATTGATG CTAATGGGAT GATAGGTGAT
GTGCTGTGGT TGGCGAGTGC TGGTGTGCCG AGTGGTACCA GTGCGATAGC CAAGCGTGTG
ATTTATACGG CGCTGAGTCA TGTTGACGAC ACCAACCGCG CATCTGTAGT ACGTCGTTTT
GTCGCTGAAA AATTGGTGGA GAGTAGTAGC GGTGATGTCG CCACTGATGC TGCGCAGGTC
TTTGGTCGCC TTGGATATAC ACCACGTGGT GTTATTGATG ACTTTGGTAG TTCTGTCACG
CCCAATCAAT TAGTGAATTA CTTGCGTGGT GACAAGAGGA TGGAAGGTGC AACACTCAAC
ACGGCACCAT TCCGCCGTCG TTTCGGTCCG TTGGGCGATA TGATTAATTC AATTCCTGTT
GTCGCAACGC GTCGTGCGAA TTATGGGTGG GCCACTGCGA GTGGGTTGCC TCAGGTGCAG
CGTGATAGTT ACTCGGCTTT CATCAATGCT CGCCAGAATT CAACGGCTGC TGAGCATATT
TTTGTTGGTG CTAACGATGG CATGTTGCAT GCCTTTGACG ATAAGGGTAC GGAGCGTTTT
GCCTATGTGC CCAACGGTGT GCTGCATCAT TTGGGTTTTC TGGCCAACCC GGAGTATCAG
CATCATTACT ATGTTGATGG CAAATCGACA TTGAGTGATG CCTATCTGGA TGGAAGTTGG
AGGAGTGTGT TGGTTGGTGG CACTGGGGCG GGTGGCCGTT CGATGTTTGC TCTGGATGTT
ACTAGCCCAA GCACGTTCAA TGAGTCAAAT GTGTTGTGGG AAATGAACAG TCAGAATGAC
GACGATATGG GGTACACCAT GGGGAAGCCC TACATCGTCC CGTTACAGGA TGGCAGTTGG
GCGGCGATTT TCGGTAACGG TTACAACAGC AGTAATGGTC GGGCTGTGCT CTTTATAGTC
AATCTGGCAA CGGGTCAGCT GATTCGCAAG ATTGAGGTGC GTGATGGGAT TGATCCCGAT
GGCTCTGATC CTGCAAACAT GGGATATAAC GGTCTCGGTA ATTTGGCGGT GTTGGATACG
GATGGCGATG GGTTGGTCGA TATGGTGTAC GGGGCTGATC TGCACGGCAA TCTCTGGAAG
TTCAACCTGA GTGGCAAAGA TCCGCAACGC TGGGGTATCG CTTATAAAGA TGGTTTGGGT
AATCCAATAC CGCTGTTTGT GGCCCGTAAT CCTCAAGGCT ATCGCCAACC GATTACGGGA
GGTTTGGAAG TGGCGGTGGG GCCGAGTGCT GGCTATATCA TCTATTTTGG TAGTGGCCGT
TATTTTGCTG CCAATGACAA CAACAGCAAA GACCTCAGTA CGTTGTATGG CATCTGGGAT
AGCGGGAGTC CTGTCATTGC AGGCCGTGCA GCTTTATCAG CTCAAATTAT CCAGGCTAGC
GATCATCCGA CGTCGCCAGA CACCCGCATT GTGACCCGTA GACCGCTGAG TTATCTCAGC
AAGCATGGTT GGTATGTCGA TTTGGTGGTA CAGGGACAGG ATCCACAGGG GGAGCGTTCC
ATTGCCACAC CATTGTTACA GGGGGGGCGT GTCTTCTTTT CGACCTATGT GCCGGGAGTG
AGTGTGAATT GTGCTTCGGG CGGGAGCAAT TGGCTTTATG TGTTAGATGC TGCTTCAGGT
GGTGCCGCGC TCGGTCAGGT CAATATACCG TCCCGTGGCT CCAGATCTAG TATGGGTAAT
AGTGATACTG GTGCGGTTTC GACGGGTGGA GATGCTCCAA TTCAGAGTGT TGCAATGACC
CGCACAGCGC CTAGACAACC GGTTTTTTGT AATCCAGGTG AACAGGGATG TCCCTTGGTG
CCAGAGACAT CTGCTGCACC TTTGGATATC CGATGCAGCG AAGTCATCAT TGATCCAAAT
GATCCAACCA GGTCCATCTC ACTGTTCAGG GCATGTGGAC GGCAATCGTG GAGGCAGTTG
CGATGA
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| Protein sequence | MKKNVLKCVL LCVMFIGLCF LVRRGITGPG PLDIAQAPLF TSNVVPPLNM LVMGRDHKLY
YEAYNDASDL DGDGVLDVGY KPDKITYYGY YNSNVCYRAN GTMFQAMSVA NGSNGKKCTG
AWSGDFLNYL TTSRMDALRK VLFGGYREVD TLTQTILRAS YTPQDAHSWG KEYASVSHDG
YDISDYAPLS APGSGHYHLF AVTTLSDNGI PQLRVLADTT FRVWNWVSIE RPVAGSDCFT
PENKRVSCVS GGSTGISDYP LRVEVCSVAD ELRESNCKLY QNNTSYKPTG ILHDYGENDR
MYFGLLTGSY QKNITGGVLH SNVSNFSREI NPLTGQFCLN GNCGSGGDVK GIVHTISSFR
MLDFNYKDYT YGCGWIATRP VKEGECWMWG NPIAEMMYET LRYFSGATAP RHEYDINNSS
QDIATLQLSH PGWKPPYTSV DQGGSGYSVC AQPTMTVFSD INPSYDDKLP GSHWSNFSGS
GDPASMRNLD VSAEADRIWE AEGGGSKLFF IGESNNNSDN APTPKVVSNL STVRGLSPEE
PSKGGTYYSA AVARYGANHK MGGSKFVRTY AVALASPLPK FEFPVGNARV SLVPFAKSVR
GFGISATSNF QPTNQIIDFY VQRVANMAGS SGADYDATIN GGRPYAEFRI NYEDVEQGAD
HDMDAIAFYT IYVNAKNQLV VTLKSEYSAG SVDQHMGYVI SGTTRDGVYL EICDLADGHS
NDGTRSSCAG QQPYKLNTPP NRLPGYCNAT PMPGDCNGLP PVATRIFSVA SQGANAVLLK
DPLWYAAKYG HDQGVILNSS GGLANYFPVN NALYLRQQVA KAFSAIQSQA GSSGSIAVVG
ASVSSTSFAV IPSYSSTHDG KDWTGEMTAY RIDANGMIGD VLWLASAGVP SGTSAIAKRV
IYTALSHVDD TNRASVVRRF VAEKLVESSS GDVATDAAQV FGRLGYTPRG VIDDFGSSVT
PNQLVNYLRG DKRMEGATLN TAPFRRRFGP LGDMINSIPV VATRRANYGW ATASGLPQVQ
RDSYSAFINA RQNSTAAEHI FVGANDGMLH AFDDKGTERF AYVPNGVLHH LGFLANPEYQ
HHYYVDGKST LSDAYLDGSW RSVLVGGTGA GGRSMFALDV TSPSTFNESN VLWEMNSQND
DDMGYTMGKP YIVPLQDGSW AAIFGNGYNS SNGRAVLFIV NLATGQLIRK IEVRDGIDPD
GSDPANMGYN GLGNLAVLDT DGDGLVDMVY GADLHGNLWK FNLSGKDPQR WGIAYKDGLG
NPIPLFVARN PQGYRQPITG GLEVAVGPSA GYIIYFGSGR YFAANDNNSK DLSTLYGIWD
SGSPVIAGRA ALSAQIIQAS DHPTSPDTRI VTRRPLSYLS KHGWYVDLVV QGQDPQGERS
IATPLLQGGR VFFSTYVPGV SVNCASGGSN WLYVLDAASG GAALGQVNIP SRGSRSSMGN
SDTGAVSTGG DAPIQSVAMT RTAPRQPVFC NPGEQGCPLV PETSAAPLDI RCSEVIIDPN
DPTRSISLFR ACGRQSWRQL R
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