Gene Xfasm12_1634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1634 
Symbol 
ID6119462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1706899 
End bp1707972 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content60% 
IMG OID641649618 
Producthypothetical protein 
Protein accessionYP_001776173 
Protein GI170730740 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1509] Lysine 2,3-aminomutase 
TIGRFAM ID[TIGR00238] KamA family protein 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCAGC CCACCGGACA TGGTGGGTTT TTCCTCAAGC GCAGCATGAT AACCGCAGCC 
TCTGTTCCCT TACAGCCATC CACCGCCAGT CCATTGCAGC CGCCACGCTG GCAGCAGGTA
TGGCGGGAGG CAATCCGCGA TCCGCGCGAG CTACTTGCAT TACTCAAGCT TGATCCGACA
TCGGTGGGTA TGAGTGAGGC GGCGGCGGCA CAGTTCCCGC TGCGCGTGCC GCGGGGGTTC
GTGGCACGGA TGCGGGTTGG TGATCTGCAT GATCCGCTGT TACGTCAGGT GTTGCCAATG
GACGCGGAAC AAGATCAGAT CGCTGGCTTC GGTGTGGATG CGGTGGGCGA TGGTGCAGCC
AAACAGGCAA CGGGCATCAT CCAGAAATAT CAAGGGCGCA TTCTGCTGAT TGCTACTGGA
AGTTGTGCGG TGCATTGCCG GTATTGTTTC AGACGGCACT TTCCGTACGC TGAAGACACG
GCTTCGCATG ATCGCTGGCG GGAAGCGGCA GCGTTCGTCA GGGCTGATCC ATCGATTGAG
GAAGTCATTT TGTCCGGCGG CGATCCGCTG TCGTTGTCTA CCGCCAAGTT GGTGGAATTA
ACCGACGCGC TGCGCAGCAT TGCCCATCTG AAACGCCTGC GCATCCACAG CCGATTGCCG
GTGGTGCTCC CTGAGCGGAT CGATACGCCG CTGCTGGAGT GGCTCAGCGC GCTTCCCTGG
CCTGTGGCGT TTGTAATTCA CGCCAATCAC GCTAACGAGT TCGACGCCAG TGTAGATGCC
GCTCTGGCGG CGCTGCGCGG CGTTGGAACC CAGTTGCTCA ATCAAGCGGT GTTACTGCGC
GGGGTCAACG ACAATATTAA TGCGCTGGCC GCATTAAGTG AACGCAGCTT CGCTGCTGGG
GTACTGCCGT ACTATCTGCA TCAGCTCGAC CGCATCGCGG GGACCGCCCA CTATGAGGTG
GAGGATGCGC GGGCACGGAC GCTACACGCG GAGTTAGTTG CGCGGCTGTC CGGTTATCTG
GTGCCACGCT TCGTGCGTGA GGTCCCTGGT GACAGCAGTA AACGTCCGCT GTAG
 
Protein sequence
MRQPTGHGGF FLKRSMITAA SVPLQPSTAS PLQPPRWQQV WREAIRDPRE LLALLKLDPT 
SVGMSEAAAA QFPLRVPRGF VARMRVGDLH DPLLRQVLPM DAEQDQIAGF GVDAVGDGAA
KQATGIIQKY QGRILLIATG SCAVHCRYCF RRHFPYAEDT ASHDRWREAA AFVRADPSIE
EVILSGGDPL SLSTAKLVEL TDALRSIAHL KRLRIHSRLP VVLPERIDTP LLEWLSALPW
PVAFVIHANH ANEFDASVDA ALAALRGVGT QLLNQAVLLR GVNDNINALA ALSERSFAAG
VLPYYLHQLD RIAGTAHYEV EDARARTLHA ELVARLSGYL VPRFVREVPG DSSKRPL