| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1603 |
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| Symbol | |
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| ID | 6119431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1674727 |
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| End bp | 1675944 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641649587 |
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| Product | pheromone shutdown protein |
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| Protein accession | YP_001776142 |
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| Protein GI | 170730709 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
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| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCCTT CTGTTTCCCC ACAACAAGAC GCCCTCACCG GACAACCGCT ACGTGTAGTT
GAACGCGATG GCGTGCACTA CACCCTCCTC GGTACTGCTC ACATCTCCCA AGCCAGCGTG
GCTGCGGTCA AACAGGAAGT TGAAAGTGGC TGCTATGACG CCATCGCTGT CGAACTGGAC
GCACAGCGCC TGCAAGCACT ATGCGATCCA GATACGTTAG CTAAGCTCGA CCTGATACAA
GTGATCCGTA AAGGACAATT GGCATTATTT ACAGCCAACC TGGCTCTAGC GGCATACCAG
CGCCGCCTAG CCAAGCAGCT AGGCATCGAA CCTGGTGCCG AACTGAAGAC CGCAGTGACC
ATGGCACGCG AACGCGATCT CCCCGTCCAT CTGATCGACC GCGAAGTCGG CCTTACTTTT
AAACGTGCCT CGGCCAAACT TGGCTTCCTC GGAAAATTGA AGTTGGGCGG TGGACTGATT
GCCGGACTGT TCGCCGCCGA TGAGGTCGGA GAAGAAGAAA TTGAAAAACT CAAGCAAGGC
GACATGCTCG AAGCTAGCTT TGGCGACTTC GCCAGCGAAA GCCCAGAACT ATACCAAACC
ATCATCGCCG AGCGCGACCG CTACATGGCC ACCCGCCTAC GCGAAGAAGT AAACAGTACA
ACGCGCAAAG TACTGGTGGT TGTCGGTGCA GGTCATTTAA CTGGATTGGC CAAACACCTT
GAGAACGACA CTGAGCCACC TACCGAACTG CGCGCGCTAC TGGAAAAAGT ACAACAGAAA
AAACGTATCC CCTGGTTCAC ACTGGGACTA ATGGCACTCA TCGCCTCTGG TATTGTGCAC
GGATTCTTGC GCGGTGGCTT GGCAATGGGC ACAGATCTGT TACTGCAATG GGCACTATAC
ACCAGTACCC TAGCCGCACT CGGCTGCGCA TTAGCAGGCA GCCACCCATT GAGTGTGCTG
GTGGCATTAC TGGTCGCACC ATTCAAACCG TTCCGGGTAA CCCTACCGAC TGGTGCCTTC
GCCGCACTGA TCGAAGTGCA TATACGCAAA CCAGCCTACC AAGACTTCCT CACCCTACGC
GACGACGCGC AAACCCTCTA CGGCTGGTAT AAAAACCGAG TCTCAAGAGT GATGCTGACT
TTCGCATTCA CCAACCTAGG CAGCATGCTC GGCGTCTGGA TTGCAGGTAT AAGCATCTAC
AATCGCCTAC ACAGCTAA
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| Protein sequence | MIPSVSPQQD ALTGQPLRVV ERDGVHYTLL GTAHISQASV AAVKQEVESG CYDAIAVELD
AQRLQALCDP DTLAKLDLIQ VIRKGQLALF TANLALAAYQ RRLAKQLGIE PGAELKTAVT
MARERDLPVH LIDREVGLTF KRASAKLGFL GKLKLGGGLI AGLFAADEVG EEEIEKLKQG
DMLEASFGDF ASESPELYQT IIAERDRYMA TRLREEVNST TRKVLVVVGA GHLTGLAKHL
ENDTEPPTEL RALLEKVQQK KRIPWFTLGL MALIASGIVH GFLRGGLAMG TDLLLQWALY
TSTLAALGCA LAGSHPLSVL VALLVAPFKP FRVTLPTGAF AALIEVHIRK PAYQDFLTLR
DDAQTLYGWY KNRVSRVMLT FAFTNLGSML GVWIAGISIY NRLHS
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