Gene Xfasm12_1451 details

Gene Information

• Locus tag: Xfasm12_1451
• ID: 6121314
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: +
• Start bp: 1516361
• End bp: 1518304
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 641649447
• Product: acetyl-CoA synthetase
• Protein accession: YP_001776003
• Protein GI: 170730570
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR01217] acetoacetyl-CoA synthase; [TIGR02188] acetate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGACC TGTACACCAT TGATCCGATG TTGGCCAAAG ATGCGCACGT AGACCGTGCT 
CACTACAAAA CGCTTTACCA CGAATCCATC GAACAACCAG AAGCATTCTG GAGCAAAGTC 
GCACAGCGGC TGGAGTGGTT CAAAGTGCCA ACCAAAATCA AAAATGTCAG CTACCAACTG 
GAAGATGTTC ACATCCGTTG GTTCGAAGAC GGTGAACTCA ATGCCAGCGT CAACTGCCTG 
GACCGCCATC TCACCTTACG TGGCGACAAA ACAGCACTCC TGTTTGAACC TGACGCCCCA 
GACGCCCCAT CCTCACGCAT CACCTACCGT GAACTATACG AGCGCGTCTG CCAACTCGGT 
AACGCACTGC GCCACCTCGG CATCGAAAAG GGCGACCGCG TCACCATCTA CTTACCAATG 
ATTCCAGATG CAGTCGTCGC CATCCTCGCT TGCGCACGCA TTGGAGCAAT CCACTCCGTC 
GTCTTCGGCG GCTTTGCAGC AAACTCCATT GCCGACCGAG TGAATGACTG CGGTAGCAAA 
CTCATCATCA CCGCAGATGA AGGGCTGCGT GGCGGCAGAA AAATTCCATT GAAAGCCAAC 
GTCGATGCCG CATTAAAAAT CCACGGAACC CAGTCCGTCG AAACCGTACT CGTCGTGCGT 
CACACCGGCG GTACGATCAA CATGCATACC CCGCGCGACC GCTGGTTCCA TGACCTCGTC 
GACATCCAAG CAACCGAATG CGCCCCAGAA CGCATGAACG CTGAAGACCC CCTTTTCATC 
CTCTATACCT CCGGCTCCAC AGGCAAACCC AAAGGAGTCC TGCACACCAC CGGCGGCTAC 
CTGGTGTACA CCAGCTACAC TCATGAAACC GTGTTTGACC TACGCGAAAA CGACATCTAC 
TGGTGCACTG CCGACATCGG CTGGATTACT GGTCACAGCT ACATCGTTTA CGGCCCCCTA 
GCCAATGGCG CCACCGTCTT GCTGTTTGAA GGCACCCCCC ACTACCCGAC CGTGTCGCGC 
TTCTGGGAAG TGATCGACAA ACATCACGTC ACCCTCTTCT ACACCGCGCC GACCGCAATC 
CGTGCCTTGA TGCGCGAAGG CGACACTCCT GTAAAAAAAA CCTCCCGCAA AAGCTTGCGG 
TTACTTGGCA GCGTTGGCGA ACCCATCAAC CCCGAAGCCT GGCACTGGTA CTACACCATC 
GTTGGCAACG GACGCTGCCC CATTGTCGAC ACCTGGTGGC AAACCGAGAC AGGAGGAATC 
CTCATCACCC CACTGATCGG TGCAACCGAC CTTAAACCAG GCTCAGTCAC CCTCCCCTTC 
TTCGGCATAC GCCCCGCCCT AGTGGATACC AACGGACAAA CACTGGATGG CCCCGCAGCA 
GGTAACCTAG TCCTGCTCGA TTCCTGGCCG GGTCAAATGC GTACCCTCTA CGGTGACCAC 
CAACGTTTTA TAGACACTTA CTTTCGCACC TACCCCAATA CTTACTTCAC CGGCGACGGC 
TGCCGCCGCG ATGCCGACGG CTATTACTGG ATCACTGGAC GTGTGGATGA CGTCATCAAC 
ATCTCCGGCC ATCGCATCGG CACCGCCGAA ATCGAAAGCA CACTCGTCGC TCACCCCAAA 
GTGGCTGAAG CCGCGGTCGT CGGCTTCCCT CACCCGATCA AAGGCCAGGG CATCTACGCA 
TACGTGACAT TAATTACCGG CGAGACACCC AGCGAAGCAC TGCACCAAGA ACTGCTCACC 
CGGGTACGCA AAGAAATCGG AGCAATCGCC ATACCCGATC ACGTGCAATG GACACCCAAC 
CTCCCCAAAA CCCGCTCCGG AAAGATCATG CGCCGCATCC TGCGCAAAAT TGCAGAAAAC 
GCACCAGACC AACTCGGTGA CACCTCCACA CTGGCTGATC CGTCTATCGT CGACTTATTG 
CTCAACGAAC GACTGAAACA CTGA 

 

Protein sequence

MSDLYTIDPM LAKDAHVDRA HYKTLYHESI EQPEAFWSKV AQRLEWFKVP TKIKNVSYQL 
EDVHIRWFED GELNASVNCL DRHLTLRGDK TALLFEPDAP DAPSSRITYR ELYERVCQLG 
NALRHLGIEK GDRVTIYLPM IPDAVVAILA CARIGAIHSV VFGGFAANSI ADRVNDCGSK 
LIITADEGLR GGRKIPLKAN VDAALKIHGT QSVETVLVVR HTGGTINMHT PRDRWFHDLV 
DIQATECAPE RMNAEDPLFI LYTSGSTGKP KGVLHTTGGY LVYTSYTHET VFDLRENDIY 
WCTADIGWIT GHSYIVYGPL ANGATVLLFE GTPHYPTVSR FWEVIDKHHV TLFYTAPTAI 
RALMREGDTP VKKTSRKSLR LLGSVGEPIN PEAWHWYYTI VGNGRCPIVD TWWQTETGGI 
LITPLIGATD LKPGSVTLPF FGIRPALVDT NGQTLDGPAA GNLVLLDSWP GQMRTLYGDH 
QRFIDTYFRT YPNTYFTGDG CRRDADGYYW ITGRVDDVIN ISGHRIGTAE IESTLVAHPK 
VAEAAVVGFP HPIKGQGIYA YVTLITGETP SEALHQELLT RVRKEIGAIA IPDHVQWTPN 
LPKTRSGKIM RRILRKIAEN APDQLGDTST LADPSIVDLL LNERLKH