| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1110 |
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| Symbol | |
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| ID | 6119635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1189916 |
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| End bp | 1191523 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641649134 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_001775696 |
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| Protein GI | 170730263 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00431691 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGGGC ATATGCGAAT AAAAACCGGA ATAAAAAAAG CACTCATCCT GATGCTTTCT
GTAGTGCTGG TGTCACTCGT TGCAATCGCC GTAGTCGCCG CGCATCGGTT TTATATCCGC
CTTCCACAGT CCAGACTGTT TTATGCATGG AAAAAAGTGG ATGAAGTCTA TTACGACAGA
ACGTTTGCTG GTTTTGACTG GCCCGCCGTC TTGGAAACGT ATAAAAAGCA TCTGCCTCGG
TTTGACTGGG ATGGGAGAGA AACCTCTCCC TTTATTCAGA ATATGCTGTC GCTCCTTGAA
GTCTCTCATT TGCGGCACAT TCCAGGTTTT ATGGCTTCAG AAAAAATTAA GGAGGAAGCT
GTATTAGCAG ATTATTTCCC AGAACTGCGT GATATATCAG GAATGGTTCT GGTCATGGAT
ATGTTACCCA GGATTTCTAG AGTACTGTCT CTAGAAACCT GGTCACCATT GTATGCGCAT
GGCGTCCGTG TGGGCGACCG TATTCTTCTA GACACACTTG ATACTAATAT TTCTGATAAG
AATAAACCTG TGCGGCTGTA TTGCTATCAC ATTAATACAG CAGGGGTAAA AAAAGAATTT
GAGTTCGACC TCCCCGCACC ACCTCTTGGT ACGCAACAGA CTGCGGTGCC TGCGGGGGAT
CATGTGCTGC ACATCGCACA CTTTGATCAG GCCGAGATAC AAGCGCTTAA ACACGTGAGT
GAAGATCGCA ATTCACCCAT CACCCAGCTG CATTATATTT CTTTAGGGGC CGTGACCACG
GCGCTTCACC TCCCAAAAAC TAAAGTCATT GATGTAGTTA AAGATTCAGA AGCTGATAAA
GCAGGTGTTG AAATCGGATC CTTCATTGGG GACGGAACCG ATCCTAAAAC AGAGTCTAAA
AATATAGGCG GAAAAACAGT CGTAAAAAGC AATGGTATTT ATAAAGTGAT CCTCCCTGAT
GGTAAAAAAG TCACTTTCTC TGTTAATAAA GAAATCACAT TGAGTGACTT TGAGAGAATC
CGTTCCGCAC AGCTCATCGG CCAAACACTG GTTATCGCAT TTAATGAGAT GACCGATGAA
AATACCCAAT GGGTATTGCA ACAGATCAAA AATACCCCTG CAACAGCGAT TGTGCTCGAT
TTACGCTACA ACACAGGAGG TTCAGCCATC GCAGAAGAGA GGTTATTGGC TGGATTTTTA
GCTTCTGGAA CCCGCATCGG AACCGAAATA GAAGGAAAAA AAACCAATGA AATAAACGTC
CCTGCCGGAT ATACACCGAC TGATAAACCC ATGGCAGTGT TAATTGGTCT AGTTTCTGCC
AGTGGCGCTG AAGTAATTGC AAGAACCCTG CAATTTCACC ACCGTGCGCG TATTTACGGC
GCCCAATCCT CGGGACAGCT ACTCGCGTCC CGTTTTTATA AACTGACTGA TGGCTCTTAT
ATACAAATTC CAAGCATCAA TTTATTGGAC CCAGCAGGGA AGCCTATTGA GTGGTATGGC
GTGATGCCGG ATGTGAAAAA ATGGAAAACC TTAAGTGATG TGCGTGCAGG CCGTGATCCA
GTGTTGGAAT GCGCCTTAGC GGACCTGTCC GGCGGACAAT GTCACTAA
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| Protein sequence | MKGHMRIKTG IKKALILMLS VVLVSLVAIA VVAAHRFYIR LPQSRLFYAW KKVDEVYYDR
TFAGFDWPAV LETYKKHLPR FDWDGRETSP FIQNMLSLLE VSHLRHIPGF MASEKIKEEA
VLADYFPELR DISGMVLVMD MLPRISRVLS LETWSPLYAH GVRVGDRILL DTLDTNISDK
NKPVRLYCYH INTAGVKKEF EFDLPAPPLG TQQTAVPAGD HVLHIAHFDQ AEIQALKHVS
EDRNSPITQL HYISLGAVTT ALHLPKTKVI DVVKDSEADK AGVEIGSFIG DGTDPKTESK
NIGGKTVVKS NGIYKVILPD GKKVTFSVNK EITLSDFERI RSAQLIGQTL VIAFNEMTDE
NTQWVLQQIK NTPATAIVLD LRYNTGGSAI AEERLLAGFL ASGTRIGTEI EGKKTNEINV
PAGYTPTDKP MAVLIGLVSA SGAEVIARTL QFHHRARIYG AQSSGQLLAS RFYKLTDGSY
IQIPSINLLD PAGKPIEWYG VMPDVKKWKT LSDVRAGRDP VLECALADLS GGQCH
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