| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0992 |
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| Symbol | |
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| ID | 6121476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1068670 |
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| End bp | 1072242 |
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| Gene Length | 3573 bp |
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| Protein Length | 1190 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641649028 |
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| Product | surface protein |
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| Protein accession | YP_001775592 |
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| Protein GI | 170730159 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport
[W] Extracellular structures |
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| COG ID | [COG5295] Autotransporter adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATTC ATACTGCACT GCCCATGGTT CGGTTGGGTG GAATCGAAGG TGTTGATCCA
TTATTTTTGC CGAAATACAA GATCGGTCAG TCGCTGCAAC ACGCAGTGAT GACGTCAGCA
GCTTCAAGTA AAAAAGGTAC GCAGCCACGA TGTTCCAACA ATGCGATGAC AGCTAAGCGT
AGCGCGAAAC TGCACGACCG GAGGCAGTTG CATATTGTCT TATTGACAGT GCTTGCAGCC
TCAACGGGAT ATACGGGGAA AGTAGCAGCT CAAGTCTATG TAAATTCCGA CTCGACTGAA
AATTGCGTAG AAATACTTGG CGACAGTAGT CAGACATCCT TCATTCATAG TGCTTCTAAC
GATAAATGCA AGCCAGATTT CACGCAAACA GAGTATTCCC TGTTTTATGA CTATAGAAAC
CTGGTTCTTG GTGGGTCCTT ATATGTCAAT GAGGGTAAAC TCGGGCTAGT CGATATTTCT
GGTGCAACTT ATTCTATGCG CCTAGGCAGC ATTGCTACCA TGAATGGCTC GGCTGGCATA
GATTCGATTG CCATCGGTTC AGGGCAAGGT TCCAAAACGG ACGGGAATAC CAGCGGCGCC
ACTGTAGCAC AGGGGCTGCG TTCGATTGCG ATTGGTACTA CGGCCCGTTC GCAATCTCAA
GATACGATTT CTATAGGGAC CGGTGCATCC ACTACAGGCA ATTTTGCGAT AGCGATAGGT
AATGGAGCAT TGACATCAAT TGCCAATGGG ATAGCGCTTG GTGCATCAAG CAGTGTCACC
ACAAGAGGAG GCGTGGCACT GGGACAAGGC TCGCTGGCTG CGACCGCTTC TGGCATTACT
GGCTATGATC CGGTCACCAA GAGCACCTCG ACTCTTTCCA CGTCAATGTG GAGAAGCACG
CTGGGGGCAG TCAGTATCGG TAATATAACC TCTAGCACCT CCCAGACACG TCAACTTACA
GGATTGGCGG CAGGTAGGTC GGATACGGAT GCGGTGAATG TTGCCCAGCT GAAGTTGCTT
GCTGAATCTG TGGGTGGTGG TTGGAATTTG ACTGCTTCTG GAGCCAACAG CAGTAATGTG
GCGCTGGGTG AGTCGGTGGA TCTGAAGAAT AGTGATGGGA ACCTCTTAAT CACCAAAACA
ACCGACAGCA ATGATGTGAC TTTTAATTTG GCCACTGCTT TAAAAGTGGA CAGTTTGACC
ACTGGCAACA CGGCGATGAC GACTGATGGT GTGGCGGTGG GTAGTAACGT GAAGTTGGGC
TCGACGGGAT TAATTATTAC AGATGGTCCG TCTGTGACCA GCTCGGGCAT TAGCGCCGGT
AACCAAAAGA TAACGAATGT TGCCGTAGGT ACTGCGGATA CCGATGCCGT CAACTTTAGC
CAGTTGCAAG CGGTGAGCAG TACGGCCAGT AAGGGTTGGA ATTTGCTGGC TTCTGGAGCC
AACAGCAGTA ATGTGGCGCC GGGTGAGTCG GTAGATTTGA AGAATAGTGA CGGGAACCTC
TTAATCACCA AAACAACCGA CAGCAATGAT GTGACTTTTA ATTTGGCCAC TGCTTTAAAA
GTGGACAGTT TGACCACTGG CAACACGGCG ATGACGACCG ATGGTGTGAC GGTGGGCAAG
AGAGTGACCT TGGATTCGAC AGGATTAGTG ATTGCGGAAG GTCCCTCGGT AATCAGTTCG
GGCATTAATG CGGCCGGCCA AAAGATCATG AATGTTGGAA CGGGTACTGC GGATACAGAC
GCCGTCAACT TCAGTCAGCT GCAAGCGGTG AGCGATACAG CAAGCAAGGG CTGGAATTTG
CTAGCTTCTG GAGCCAACAG CAGTAATGTG GCGCCGGGTG GGTCGGTGGA TCTGAAGAAT
AGTGATGGGA ACCTCTTAAT CACCAAAACA ACCGACAGCA ATGATGTGAC TTTTAATTTG
GCCACTGCTT TAAAAGTGGA CAGTTTGACC ACTGGCAACA CGGCGATGAC GACTGATGGT
GTGGCGGTGG GTAGTAACGT GAAGTTGGGC TCGACGGGAT TAGTTATTAC AGATGGTCCG
TCTGTGACCA GCTCGGGCAT TAGCGCCGGT AACCAAAAGA TAACGAATGT TGCCGTAGGT
ACTGCGGATA CCGATGCCGT CAACTTTAGC CAGTTGCAAG CGGTGAGCAG TACGGCCAGT
AAGGGTTGGA ATTTGCTGGC TTCTGGAGCC AACAGCAGTA ATGTGGCGCC GGGTGAGTCG
GTAGACCTGA AGAATACCGA TGGAAACATC GTGATCAGCA AAGAAAGCGG CAGCAATGAT
GTGCTTTTCA ATCTGTCCAG CAGTTTGAAA CTGGACAAAT TGACCGTTGG CGACACGGTG
ATGACGACCA ATGGTGTGAC AGTGGGGAGT GGCGTGACGT TGGGTTCGAT GGGATTAGTT
ATTACGGATG GTCCCTCGGT GACCAGTTCT GGTATTAATG CTGGCAGCCA AAAGATTACG
AATGTTGCCG CAGGTACTGC GGACACGGAT GCTGTTAATC TTAGCCAACT TAATACTGCA
ATGGCGAGCT CTGGCGCTAA ATCAGTCCAT TACTACAGTA CGTATGATGG TGGTACCCAA
GGAGGTAACT ACAATGGTGA TGGTGCGACA GGCAATGGGT CTATAGCCGT TGGTGTTGGA
ACGCTTGCAT CCGCTGAAGG AGCGACAGCA ATGGGTTCAG GGGCGGCTGC CAGTGGGAAA
GGCTCCACGG CGATCGGTCG TAACGCAGTT GCCAGCGCTG ATGGTAGCGT GGCGTTGGGC
GATGGTGCAA AGGATGGCGC GCGTGGGGCA GAGAGTTACA CCGGTAAATA TTCAGGCGTA
CAGAATAATA CGGTGGGAAC TGTTTCGGTA GGTGATGCTT CCAAGGGTGA AACCCGCACA
GTGAGTAATG TGGCTGATGC CAAAGAAGCG ACGGATGCGG TGAATTTGCG TCAGCTTGAT
CAAGTGGCTC AAGATGCCAA TCGTTATGTT GATAACAAGA TAGAAAGCCT TAGCGAAGGG
CAGACTTTCG TTAAGGTGAA CAGCGTGAAC AATAGTGCCA CTCCTATTGC AGCTGGAGTC
GATGCAACAG CGATTGGTGT CGGTGCCACC GCTTCGGGTG CCGATAGCAT TGCGATGGGT
AATAAAGCCA GTGCGTCTGC TGACAATGCG GTTGCCATTG GTAACCATTC AGTAGCCGAC
CGTGCAAACA CTGTTTCTGT AGGATCGGCT GGTTCTGAGA GGCAGGTGAC GAATGTAGCC
GCTGGCACTG CTGATACTGA TGCGGTCAAT GTAAGCCAAC TCAATCAAGG CTTGATCACT
GCCAAACAGT ACACGGATGG GGTCGTAGGG AGTCTTCGTA GGGATACTGA CGGTGGTGTG
GCGGCAGCAA TTGCAACAGC AAATCTCCCA CAGGCTTATA TTCCGGGACG CGGGATGACC
TCCGTAGGCG TTAGTAGTTA CCGAGGGCAA TCTGCCATTG CGGTGGGTGT TTCTTCGGTT
TCTGAAAGCG GACGTTGGGT GTTCAAGTTC AGCGGTAGTG CAAATACCCG TAGTCAAGTG
GGTATTGGTG CAGGTGTGGG TTATCAGTGG TAA
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| Protein sequence | MQIHTALPMV RLGGIEGVDP LFLPKYKIGQ SLQHAVMTSA ASSKKGTQPR CSNNAMTAKR
SAKLHDRRQL HIVLLTVLAA STGYTGKVAA QVYVNSDSTE NCVEILGDSS QTSFIHSASN
DKCKPDFTQT EYSLFYDYRN LVLGGSLYVN EGKLGLVDIS GATYSMRLGS IATMNGSAGI
DSIAIGSGQG SKTDGNTSGA TVAQGLRSIA IGTTARSQSQ DTISIGTGAS TTGNFAIAIG
NGALTSIANG IALGASSSVT TRGGVALGQG SLAATASGIT GYDPVTKSTS TLSTSMWRST
LGAVSIGNIT SSTSQTRQLT GLAAGRSDTD AVNVAQLKLL AESVGGGWNL TASGANSSNV
ALGESVDLKN SDGNLLITKT TDSNDVTFNL ATALKVDSLT TGNTAMTTDG VAVGSNVKLG
STGLIITDGP SVTSSGISAG NQKITNVAVG TADTDAVNFS QLQAVSSTAS KGWNLLASGA
NSSNVAPGES VDLKNSDGNL LITKTTDSND VTFNLATALK VDSLTTGNTA MTTDGVTVGK
RVTLDSTGLV IAEGPSVISS GINAAGQKIM NVGTGTADTD AVNFSQLQAV SDTASKGWNL
LASGANSSNV APGGSVDLKN SDGNLLITKT TDSNDVTFNL ATALKVDSLT TGNTAMTTDG
VAVGSNVKLG STGLVITDGP SVTSSGISAG NQKITNVAVG TADTDAVNFS QLQAVSSTAS
KGWNLLASGA NSSNVAPGES VDLKNTDGNI VISKESGSND VLFNLSSSLK LDKLTVGDTV
MTTNGVTVGS GVTLGSMGLV ITDGPSVTSS GINAGSQKIT NVAAGTADTD AVNLSQLNTA
MASSGAKSVH YYSTYDGGTQ GGNYNGDGAT GNGSIAVGVG TLASAEGATA MGSGAAASGK
GSTAIGRNAV ASADGSVALG DGAKDGARGA ESYTGKYSGV QNNTVGTVSV GDASKGETRT
VSNVADAKEA TDAVNLRQLD QVAQDANRYV DNKIESLSEG QTFVKVNSVN NSATPIAAGV
DATAIGVGAT ASGADSIAMG NKASASADNA VAIGNHSVAD RANTVSVGSA GSERQVTNVA
AGTADTDAVN VSQLNQGLIT AKQYTDGVVG SLRRDTDGGV AAAIATANLP QAYIPGRGMT
SVGVSSYRGQ SAIAVGVSSV SESGRWVFKF SGSANTRSQV GIGAGVGYQW
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