| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0860 |
|---|
| Symbol | |
|---|
| ID | 6121422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 930291 |
|---|
| End bp | 930689 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641648912 |
|---|
| Product | general secretory pathway protein I precursor |
|---|
| Protein accession | YP_001775477 |
|---|
| Protein GI | 170730044 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.1118 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTGTC AGCGTGGTTA CAGTTTGCTG GAAGTCATTG TGGCGTTTGC CATTTTGGCG
TTGGCGCTGA GTTTGCTGCT CGGTACCCTG ACAGGTGGAA CCCGTCAGGT GCGTCGGGCC
GATTTGGCCT CGCAGGCCAC GTTGTACGCG CAGTCGTTTC TTGCCCAACA AGGCGTCGCT
ATGCCGTTGC ATGTGCAGCA TCAGCAGGGC GAGTTTGAGA ACGGTCGTTT TCGTTGGATG
TTGGAGACGC GACCCTATGA GAATTCACCA CGCTCACCTG ACGGTGCTCA ATTGCTGGAG
TTGATTCTGT CAGTGCGCTG GGGCGATGAG CCTGATCAAT CGTTGCAGTG GCGGACATTG
CGCTTTGTGC GTCTGCAACC GCCTGGTGAC GAACTATGA
|
|---|
| Protein sequence | MKCQRGYSLL EVIVAFAILA LALSLLLGTL TGGTRQVRRA DLASQATLYA QSFLAQQGVA
MPLHVQHQQG EFENGRFRWM LETRPYENSP RSPDGAQLLE LILSVRWGDE PDQSLQWRTL
RFVRLQPPGD EL
|
|---|
| |