| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0859 |
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| Symbol | |
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| ID | 6121421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 929788 |
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| End bp | 930294 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641648911 |
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| Product | general secretory pathway protein H precursor |
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| Protein accession | YP_001775476 |
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| Protein GI | 170730043 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.552606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCCTT GTTCTGCTCC GTTCCGTTTT CAGACCTCTT CAGGTGCGCC GGTAGATGCA
CAGGGCGTTT CGTTGTTGGA AATGTTACTT GTGATTGCTT TGATCGCCTT GATCAGCTTG
CTTGGCGTTG CGGTGTTGTC TGGTGGTATG GATGGTGTTC AGCTGCGCAA CAGCGGTAAG
CAGCTTGCTG CGGAGTTGCG TTACACACGT ACTGTGGCGT TGGCGACGGG GACTGCACAG
CGTTTTATGA TCGATCCGCA GCGACGCCGA TGGCAGGGAC CCAATGGTCA TCAGGGCAAA
TTGCCTGGTG CATTGCAGAT TCGTTTCAGT GGTGCGCAGC AGTTGCAGAC GTCTTCGGGT
GAGGGGGTGA TTCAGTTCTT CGACGATGGT GCTTCAAGTG GTGGACGTAT CGATCTGGAA
ATGAAGCGTG CCTATTGGCG TATTGATGTG GGTTGGATCA CCGGTGAGGT GCGTTCCGGA
CCGTTGCGGA CATCTGCATC ATTATGA
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| Protein sequence | MLPCSAPFRF QTSSGAPVDA QGVSLLEMLL VIALIALISL LGVAVLSGGM DGVQLRNSGK
QLAAELRYTR TVALATGTAQ RFMIDPQRRR WQGPNGHQGK LPGALQIRFS GAQQLQTSSG
EGVIQFFDDG ASSGGRIDLE MKRAYWRIDV GWITGEVRSG PLRTSASL
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