| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0857 |
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| Symbol | |
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| ID | 6121419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 927778 |
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| End bp | 928995 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641648909 |
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| Product | general secretory pathway protein F |
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| Protein accession | YP_001775474 |
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| Protein GI | 170730041 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.555035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGTGT ACCGCTATAA GGCGTTGGAT GTGCGTGGTG ACTTACTCGA AGGCCAGATG
GAAGCAGCCA GTGAAGCCGA GGTTGCCGCG CGGCTGCAAG AGCAGGGACA TGTGCCTGTT
GAGGCGAGTT TGTCCAACGG CGATGCGGTC ATGCCGTCAT TGCGAAATTT TCTGGGTGAG
AAGCCATTTT CTGGTCTCGG CTTGATTCAT TTCACTCAAC AATTGGTGGC GTTGCTCGGT
GCCGGTCAGC CTTTGGATCG TGCGCTTTCC ATCCTGACTG ATCTTCCAGA TAACGAGAAG
AGCCGCCGTA TTATTGGCGA CGTTTGCGAC ATTGTGCGTG GCGGTACTCC GTTGTCTATT
GCCTTGGAAC GTCAGCATGG TGTGTTTTCG AGGTTGTATG TGACGATGGC ACGTGCTGGT
GAGAGTGGCG GCAATATGCC TGAGACGCTG CAGCGGTTGG CTGATTATCT GGAGCGTAAC
CAGGTGGTGC GTGCCAAGGT GATTAATGCG CTGATTTACC CTGTGATCCT GATTTTTGTG
GTTGGCGGTG CGCTTGCCTT TTTGCTTGGT TATGTTGTTC CGCAATTTGG CGCGATGTAT
GAGAGTTTGG ATGTGGCGTT GCCGTGGTTT ACCCAGGGGG TGCTGGCATT GGGTCACTTC
ATCGGTGACT GGTGGTTCTT ACTATTAGCG GTGATTGGCA TCGGTATGAT TTTTGTCGAG
CGTAAGCGGC GGGATGTTGC ATTCCGTGCG CGGTTCGATA CGTGGTTACT GCGTCAACGT
CTGTTGGGTA CGCTGATTGT TAAGTTGGAG ACTGCCCGGT TGGCACGTAC ATTGGGTACG
TTGCTGCGCA ACGGTGTGCC GTTGTTAAGC GCGTTGAGGA TTTCCCGTAA TGTGTTGTCC
AATGCAGCGT TGGTGGATGA TCTTGGTAGC GTTGCCGAAG ATGTGAAAAA TGGTCTGGGA
TTGGCGGGAG CGTTGGGGCG TGGCAAGCGT TTCCCCCGCT TGGCGGTGCA GATGATTCAG
GTTGGTGAGG AGTCCGGTAC ATTGGATACG ATGCTGCTCA AGGCGGCTAG CTCCTTCGAG
CAGGAGAGTA CGGTGATGAT TGATCGCTTG CTTGCTGCGC TGGTGCCAGC GATCACGCTG
GTGATGGCGA TGATTATCGC TGTGGTGATT CTGTCGGTCT TGGTGCCGTT GTATGACCTG
ACCAATTCGA TTGGCTGA
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| Protein sequence | MPVYRYKALD VRGDLLEGQM EAASEAEVAA RLQEQGHVPV EASLSNGDAV MPSLRNFLGE
KPFSGLGLIH FTQQLVALLG AGQPLDRALS ILTDLPDNEK SRRIIGDVCD IVRGGTPLSI
ALERQHGVFS RLYVTMARAG ESGGNMPETL QRLADYLERN QVVRAKVINA LIYPVILIFV
VGGALAFLLG YVVPQFGAMY ESLDVALPWF TQGVLALGHF IGDWWFLLLA VIGIGMIFVE
RKRRDVAFRA RFDTWLLRQR LLGTLIVKLE TARLARTLGT LLRNGVPLLS ALRISRNVLS
NAALVDDLGS VAEDVKNGLG LAGALGRGKR FPRLAVQMIQ VGEESGTLDT MLLKAASSFE
QESTVMIDRL LAALVPAITL VMAMIIAVVI LSVLVPLYDL TNSIG
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