| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0836 |
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| Symbol | |
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| ID | 6121398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 900349 |
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| End bp | 902400 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641648889 |
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| Product | TonB-dependent receptor for iron transport |
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| Protein accession | YP_001775454 |
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| Protein GI | 170730021 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0639266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTCAT TCCGCTGCTT TTTCTCGGTG TCGCTGTTTA GTCTTATTTT ATGTAGTGTC
GTTTTCGGCG TTCATGCCAC TGCTGTTACT ACCAGTACGG ATCATTCTCT ACCGTTGAGC
CTCGGTAAAA TTCAAGTTGA TGGGACTCAT GACGGTGCCA CGTTAGTGGA TAGCAAGCTT
GGTTCTGTCG ATGTCCTGAG CGATGACCTG CTGCAAGGCC AGCATGTCGA TTACACCTGG
GAAGTATTCA TGCGCGCACC GGGTGTGCAG GTGACGCAGT TTAAAATGGG TACCGAGTCT
GGTCGTATCT CCTTCAGGGG ATTCAATGGC GAAGGCCGTA TTAACGCGAT TAAATTGCTC
ATTGATGGTA TCCCCAGTAA CGACAATGCG GGGGGGATGC CTTACCTTGA TGCGATCTCC
CCTTTGGGGA TGAGCGCGAT TGAGATTGTG CGTGGTACGA ATGATCCGCG CTATGGCCTC
AACGCGATCG CAGGCCATGT CGACGTGATT ACCCGCAGTG GTGGCAACGA TGGTTTGCTC
AGTGTGACTA CCGGTGACTT CGGCACTCGC AAGATTCAGT GGGTCAAAGG CATTGAGCGT
GGCGCGTGGA GTCAGAACTA CGTTGTAAGT TGGCTTGATT CGGATGGATA CCGGGATCAT
GCGCGTGCAA TCAAACGTGC TGTCTCTGGC AAATGGGGAT ATGCCGATCC TAGAGATGCG
TGGCGTGCTG GTTTGAGTGT GCGCTACTTT CATAATGATG CTCAGGAGCC CGGATACCTG
ACTTATGATG CTGCTGTCGC CGATCCGCGC ACTTCGCCAG CGTATTCTGG ACAGGACTAC
TGCCAACGCC AAACCGTACA GACTGCTTTG CACTTGGATG GGAGGATGAG TGAAGCATTC
CATTGGACTG CTAAGGCTTA TATCAACCGC TATACCAATG ATCGTGTGGT GAAGTTCACT
GCTGCCAGCG CACGTCAGGA GCGCTACACC GATGAAACCC ATCGTGGCGT GTTGACCAAT
GCGATCTGGC GACCTTCGGT AGATTGGGCG TATGAATTTT CCATTGAAGG CGGTGTTGAT
GCGCAATGGC AGAGCAACGT GTCACGTCGC TATCGCATGT TGGATGGTCA GCGCGGCACG
GTGCTGCGTG ACTGGGATTT CGATCTGGAT ACGTACGGCG CTTATTTACA ATCAATGATC
CGCGTCAACG ATTCCTTGAA GTTGGTTCCA GCCTACCGTG TCGATCGTAT TGATGGTCGG
TTTAGTGACA TCGCTAGTTG GCTGCGCTAT CCGGTGTACC GATACGGCAC GATCCAACAG
CCGAAGTTCA GTGTGTCTTA TGACGTGAGT CAGGATGTGA CTGTCTATGC CAACTGGGGG
CGTACTTTCC AGATTGGTAG TGGTAATGGT GCCTATCGCA CTCAAGCTGA TGATCTGGCG
CCGTCGATGA ATGATGGTTG GGAAACTGGA TTGACTTTCA AGCCGTGGTC TTGGGCTAAT
GCGCGCTTGG TGTATTGGCA GCAGCGTGCT TCCGGTGAGG TGGCCACTCT CTTCGGTACG
AATGGCGCTA TTGCCATTAA CGAGGTTGGT AATGTTGGCA AGACGTTACG CAATGGCTGG
GATGCGCAGC TGAACTTGCA GCCGGACGAG CAGTGGCGTG TATGGCTGGG CTATTCCCGT
CAGAAAGCTG AGATTGCTAT TCCAGATCCG AGTGCGCCTG CCACCCGTGG TAAACAGATC
GAGAATGTGC CGCGTTGGCT TACCAATGTT GGAGCGGAGT GGCAGGTGTT ACCCAAGCTT
AAGTTCAGTG CTTGGGGGAA TGGTCAGGGA AACTATTATG TTGAGCGCAC TAACACACTG
GGGCGTTATG GCCGTTATTT TCTTAGCAAT CTTAGTGCCA CTTGGTTGCT TTCGAACAAG
AGTGAATTGA CATTGCAACT GAATAATGTG ACCAATCGTT TCTACGTCTA TGCCTGGTAT
GACAGCGGTC TTTCCGGCTA TTCACCTGGT GACGGCCGTG CACTTTATCT GACCTGGAAT
CTGACCTTTT GA
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| Protein sequence | MPSFRCFFSV SLFSLILCSV VFGVHATAVT TSTDHSLPLS LGKIQVDGTH DGATLVDSKL
GSVDVLSDDL LQGQHVDYTW EVFMRAPGVQ VTQFKMGTES GRISFRGFNG EGRINAIKLL
IDGIPSNDNA GGMPYLDAIS PLGMSAIEIV RGTNDPRYGL NAIAGHVDVI TRSGGNDGLL
SVTTGDFGTR KIQWVKGIER GAWSQNYVVS WLDSDGYRDH ARAIKRAVSG KWGYADPRDA
WRAGLSVRYF HNDAQEPGYL TYDAAVADPR TSPAYSGQDY CQRQTVQTAL HLDGRMSEAF
HWTAKAYINR YTNDRVVKFT AASARQERYT DETHRGVLTN AIWRPSVDWA YEFSIEGGVD
AQWQSNVSRR YRMLDGQRGT VLRDWDFDLD TYGAYLQSMI RVNDSLKLVP AYRVDRIDGR
FSDIASWLRY PVYRYGTIQQ PKFSVSYDVS QDVTVYANWG RTFQIGSGNG AYRTQADDLA
PSMNDGWETG LTFKPWSWAN ARLVYWQQRA SGEVATLFGT NGAIAINEVG NVGKTLRNGW
DAQLNLQPDE QWRVWLGYSR QKAEIAIPDP SAPATRGKQI ENVPRWLTNV GAEWQVLPKL
KFSAWGNGQG NYYVERTNTL GRYGRYFLSN LSATWLLSNK SELTLQLNNV TNRFYVYAWY
DSGLSGYSPG DGRALYLTWN LTF
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