| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0821 |
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| Symbol | |
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| ID | 6121383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 880951 |
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| End bp | 883104 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641648874 |
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| Product | oligopeptidase B |
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| Protein accession | YP_001775439 |
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| Protein GI | 170730006 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1770] Protease II |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATCA AACTTCCCTT CTTATTTTTC GGCCTGATGA ACGTGACTGC TGCTGTTGTA
AGTGCTCCTC TCCCTCCTGA TATCGCTAAG CATGCCCATG CGATCAAAGC GCCGTTTGGC
GCAATCCGCA ATGATAATTA TTACTGGTTG CGTGATGACA CGCGTACGAA CAAGGCGGTG
TTGAGTTATC TGAATGCTGA GAATGCGTAC GCCGACAAGG TGTTGGAACC GCTCAAGCCG
TTACAGGAGA CGTTGTATAA GGAGATTGTT GCTCGTATCA AGGAGGATGA TGCCAGTGTA
CCGTACCGGA AACACGGTTG GTTTTACTAT TCCAGGTTCG AATCCGGTAA GGATTATCCG
ATTCATGCGC GTCGCAAAGA TGGTTCTGGG CTTGATGCTG CCATGATCCT GGCGGCGAAT
GCGTCCGGTG ACTTTTCTGG TGAACAATTA TTACTGGACG TTAACGCGTT GGCTGCAGGT
AAGAGTTACT TCAGTGTGGC TCATGCTGAG GTGAGTCCTA ATACTCATCT GTTGGCTTGG
GCCGAGGACG GTGTGGGTCG GCGTCAGTAC ACGGTTCGCT TCAAAAATCT GGAGACTGGG
GTGCTTTATC CGGATGAAAT CCATGGTGCG TCGTCTAGCG TGGTTTGGGC TGACGATAAT
AAGACGTTGT TCTACATTGA GAATGATCCT AAAACGCTGC TGACTAAGCG TGTTAAAAAG
CATGTGCTTG GTACTCCTGT TAGTACCGAT GTGGTGGTTT ATGAGGAGCA CGATGATAGT
TTCTATATGG ATATTGAACG TACGCGTGAT GAGAAATACA TCGTGGTTTC TATGGAAAGC
ACGGTTTCTT CCGAAATGCG TTACGCACCT GCGGATCTGT CGAAGGGATT TACTGTGTTG
GCTGGGCGTG AGCGCGATGT GAAGTATTGG GGAGATCATT TTGACAGTCG TTGGGTGATG
CGCACGAATG CCGACGGTGC CAAAAATTAC AAGTTGGTCA CTGCACCCAG TGATGCGACT
TTGCGTAGCC AGTGGCGCGA TTGGGTCGTG CACGATCCAG CAGTCTTTAT TGAGGATTTT
GAGCTGTTCG ACGGTTTTAC TGCGATCCAA GAGCGTTCTC AGGGCTTGGA GCGGGTGCGT
CTGCTCAAGG CTGATGGCCA ACACACTGAT GTTGCTGCGG ATGAGCCGGC GTACTCAATG
GGTCTTTCTG AGAATCCCGA GCCGGACAAT CCGTGGCTGC GTTATACCTA TACTTCGTTA
ACGACTCCGG CGACGACTTA TGAGTTTAAC GTGCGTACTG GTGAGCGTCG TCAACTCAAG
CAGCAGCCTG TGATTGGTTA CGATCCGTCG CAGTACGTCA CGGAGCGTCT GTGGGTGACT
GCGCGGGATG GTGTGAAGGT GCCAGTGTCG CTGGTGTATC GCAAAGGTTT TAAGAAAGAC
GGCACTGCTG CGCTGTATCA GTACGCGTAT GGCAGTTACG GTTTGTCTAC AGATCCAGGG
TTTAATTTGC CAGTGGTCAG CTTGCTTGAT CGTGGTGTTG TCTACGCGAT TGCGCACATC
CGTGGTGGTC AGGAGATGGG GCGGCAGTGG TATGACGATG GTAAGTTGCT GCATAAGCAG
AATACGTTTA ATGATTTTAT TGATGTGACG CGGGAATTGG TTGCGCAGGG GTATGCCGCC
AAGGGACGTG TGGCCGCGGC CGGTGGTAGT GCCGGTGGTT TGTTGATGGG TGTGGTGGCT
AATCAGGCGC CGAGTGATTA CCGTGTGATC GTGGCGCAGG TGCCATTTGT TGATGTAGTG
ACGACGATGT TGGACCCGAG TATTCCGTTG ACCACCAATG AGTACGATGA GTGGGGTAAT
CCTGAGCAGA AGACTTATTA CGATTACATG TTGACGTATT CGCCTTACGA CAACGTGGTG
CATCAGGCTT ATCCAGCGTT GTTTGTTGGC ACGGGGTTAT GGGATTCACA GGTGCAGTAT
TGGGAGCCGA CTAAATGGGT GGCTAAGCTG CGTGATGAGA ATACGGGGAC GTTTCCGATT
GTATTCAGAG TCAATATGGA TGCCGGTCAT GGTGGGAAGT CTGGGCGTTT CAGGCGTTAC
CAGGAATTGG CTGAGTACTA TGCTTTCGTA CTTCACCATC TTGAAGTGAA GTGA
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| Protein sequence | MTIKLPFLFF GLMNVTAAVV SAPLPPDIAK HAHAIKAPFG AIRNDNYYWL RDDTRTNKAV
LSYLNAENAY ADKVLEPLKP LQETLYKEIV ARIKEDDASV PYRKHGWFYY SRFESGKDYP
IHARRKDGSG LDAAMILAAN ASGDFSGEQL LLDVNALAAG KSYFSVAHAE VSPNTHLLAW
AEDGVGRRQY TVRFKNLETG VLYPDEIHGA SSSVVWADDN KTLFYIENDP KTLLTKRVKK
HVLGTPVSTD VVVYEEHDDS FYMDIERTRD EKYIVVSMES TVSSEMRYAP ADLSKGFTVL
AGRERDVKYW GDHFDSRWVM RTNADGAKNY KLVTAPSDAT LRSQWRDWVV HDPAVFIEDF
ELFDGFTAIQ ERSQGLERVR LLKADGQHTD VAADEPAYSM GLSENPEPDN PWLRYTYTSL
TTPATTYEFN VRTGERRQLK QQPVIGYDPS QYVTERLWVT ARDGVKVPVS LVYRKGFKKD
GTAALYQYAY GSYGLSTDPG FNLPVVSLLD RGVVYAIAHI RGGQEMGRQW YDDGKLLHKQ
NTFNDFIDVT RELVAQGYAA KGRVAAAGGS AGGLLMGVVA NQAPSDYRVI VAQVPFVDVV
TTMLDPSIPL TTNEYDEWGN PEQKTYYDYM LTYSPYDNVV HQAYPALFVG TGLWDSQVQY
WEPTKWVAKL RDENTGTFPI VFRVNMDAGH GGKSGRFRRY QELAEYYAFV LHHLEVK
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