| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_0688 |
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| Symbol | |
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| ID | 6119373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 736148 |
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| End bp | 739687 |
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| Gene Length | 3540 bp |
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| Protein Length | 1179 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641648751 |
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| Product | histidine kinase/response regulator hybrid protein |
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| Protein accession | YP_001775316 |
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| Protein GI | 170729883 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG3292] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCGCT TCCGTGTGCT TGATGCCACG AGCGGATTGC CATCCAACGT GGTGCGGGCA
ATGCTCCAGG ATGCTGCTGG TTATTTGTGG TTGGCCACCA GTGATGGTCT GGCGCGCTAT
GACGGCACCG CATTCAAGGT GTGGCGGCAT GATCCTAATG ATCCAGGCTC ATTGCCGGGC
GACTCCGTCC TGGCTTTGTA TATTGATGTA CAGGATAGGA TTTGGGTGTT GTCTGAGAAT
GCAGGGCTTG CTGTGCTTGA TGCGCAGCGT CGTCGCTTCA TCCAGATTCC GGTAGGTTCG
GTTGCTAAAA CCGACGCCTT ACATACGCTG ACCGGCCATG GCGATGCGAT CTGGCTGAGT
GATCTACATG CTTCGGTCAT ACGGATTGAT AGCGCAGGAG CACTCACCCG TTATGCACTG
GCTGATGTTT CGCCGACTCT GAAGGATACC CCGGTTGTCG CGTTGACCTT TGATGCCAAT
GGACGACTGT GGGTGGGCAC GCCTGATGGC CTACTGTATT TTGAGGCGGG ACGCTTGCAT
TTGGCGCCGC CGCCTTTGGA TAAAGCCTCG ATTCATTCCA TTGCTGCCGT GGGTAGCCGA
CTGTGGGTTG GCAGTACGGA TGGCGTGTAT CTTCAGGATG CTGAAGGACG TTGGCGTGCG
CCGAACTGGG GGCCAATGTT TGCTTTTGGC AATCTACTCT TGTCTGTGGC TGATGCTGGT
GACGGTGAAT TTTGGTTGGG TAGTGAGCGT GGTTTGTGGC GTACTCGACA AGAGCGACCG
CCAGTACAGA TCCATTTGAG TGACATGCAT CACGGTGTGT CCACTGTCTC GTCCTTGTGG
CGTGATACGA GTGGAGGACT GTGGGTACCG GTTTATGGTC GTGGTCTAGG CTATTTGCGC
CAAGATTGGA AGCGAATGGC GGTCGTGCGA CCGAGTGATG GTGGTGAAAG TTCCTATTGC
AATGTTGCCC CGGCGGCGTA TTCCGGTGGA CTTTGGCAAT TGAATCGTAT TGGAGAGTTG
ATGCATCTGA ATACCAGCAC CGGTGAGCTG GTACACACAG GATGGCAGCG TCATGAGCTG
CGCGGCGTGA ACATTACCAC CACATTGGAG GACAGCCGTG GCCGGTTGTG GCTGGCAAAC
ATGCAAAATG GTTTATCGCG CCTGGATCTG AAAAACGGCC AGTGGCGTGA GTGGGCTGCA
CATGGAGATG ACGCGGTCCC GCTGTATGGT CCTATCTCTT GGATCGTGGA AATGCCTGAT
AGCAGCCTTT GGCTGGAAGC ATTGGGCGTG CTGCAGCAGC GGGATCTTGA AAGCGGACGT
GTGTTAAATC AGATTGTACC GGGCAGTCAT GGCCTGGATG GTTCCCGCGT CGAGCAGATC
GGCCTTGGCC CAGATGGGCG TTTGTGGCTG GCTGCTGGTA GTGGCGTGTA TGCCTGGGAG
TCACAGCGCC GTATGTTCGT CCCCATACCC GATTTGACAG GAACACGTGC CTATAGCTTT
GTCCCGGTGG GAGGCAATGA AGTTTGGGTG CATCGGTTAC GGGGCTTGGA GCAATGGCGG
CACAGTAGTC ACGGTTGGAA ACGGGTTGCT TTAGTGGGAC CACAGCATGG GCTGCCTGCC
ATGGAGTCAC TAGGGATGCA GCATGACGCC CAGGGCCGTA TTTGGTTGTC CACACGCCGC
GGCCTATGGC GTATCGACAA TACTGATGAG CTCCAGGTGC GTAACTTCGG TTTGCGTGAT
GGTTTGGGTA CCCAGGAGTT TGCTGAGGCC TGCTTGTGGA TGGCTCCGGA TGGCGTATTG
GTTGGCGGCA CTACCGATGG CTACTTGATG CTGTTTGATA CTGCGATGCC TGACCCAGCC
CCATTTGTAC CGCAGCTGCG TATGGAGACC GTCAGTGTGA TCCGTGCTGG GCGCCGTATT
GATTTTCCGG TTGATCGGCC TTTCGAACTG CTGCCGAATG ATCGCCAACT GATTGTCGGC
GCGCGGTTGC TTTCCTTCGG TGATCCACTG TCCAACCGCT ACAGTTATTG GTTGAAAGGT
TTCGATACCG GGTGGATTGA TCAGGGGAGT AGCGGTACAC GGGAATTCTC CTCGTTGCCC
CCGGCTGACT ACACATTATT GATTCAGGGC ACCGACCCGA TGGGCAATCT GTCGCGCATC
CATCTGGTGA CGTTTCGCGT ATTGCCGCCC TGGTGGCGCA GTGCGTGGGG GATGAGCGTA
TTAACGGGGA GCGGATTGCT ATTGCTCTGG GGCGTTTCAT GGAACTATCA CCGCCGTTTA
CGGCGTCGTG CCCGCTTGCA GCTGGAACAA CATCAGCGCG AAGTTGCCGA GCGGGCCTCA
CTGGCTAAAA CGCAGTTTTT GGCGACGTTG GGTCACGAAG TACGCACCCC GATGACCGGA
GTGCTTGGGA TGAGCGAATT GTTATTGGAA ACACCGCTTG ATACGCGCCA GCATGGCTAT
GCGACCTCGA TCCAAGCGGT AGGTAAGCAC CTATTGCGTT TGGTCAATGA TGCCCTGGAT
CTGGCCAAAA TCGAGGCTGG AAAACTGTCG TTGGAACGGC GTGATTTTGA TTTTCATGCC
TTGTTGGAAC AGGTAGTGGC AATGATCCGG CCGATGGTGG AGCGTAAAGG ATTGCGTTTT
GTCTATCGAT TGGATCCAGA GGTGCCCCAG TATGTCCATG GGGATGCTGA TCGACTACAG
CAAATTTTGC TCAACCTGTT GATCAATGCC ACCAAATTTA CCGAGCACGG AGAGGTTGTA
TTACAGGTCG CGCCTGGGCA GGAACAAGCC TGCCTTGGTG TGCGTATTGA CGTGGTCGAT
ACCGGCCCTG GGTTGAGTGA AGAACAATGC CAGCGCTTAT TCCGTCGTTT TGAGCAAGTC
AATGGTGCAT CCACCGCAGC CCGCTATGGT GGCAGCGGAC TTGGTTTGGC CATTTGCCGT
GAGTTGGCTA CCGTGATGGA GGGGGAGATC CACGTAGATA GCGAGCTTGG CAAAGGCACC
TGCTTCCGTG TTCTGCTGCC TCTTCCATGG GTGTTGGCGG TGCAACCTGC GGTTGCCGTT
ATGGATATGG AACCCTCACC CTGCTCCAAT CCGTTGCACT TGCTGCTGAT TGAGGACGAT
CCGACAGTGG CGGAGGTGAT TGTTGAACTG TTGCGTGTCC GTGGGCATCG GGTGACTCAT
GCTTTACATG GGTTGGAGGC CTTGGTGGAG GTGACGCTGA CACGTTTTGA TGCCTGTTTA
TGCGATCTAG ATCTCCCTGG ATTGGATGGT GCCGGATTGA TTGTGCAACT GCGGGCACAG
GGGCAGTCCT TTCCAATCGT CGTGGTCACT GCGCGTACTG ATGCCGATGC CCGGAGGCAG
GCGTTCCAGG TTGGCTGCGA TGCGTTTTTA CGCAAACCGG TGACCGGTGA GATGCTGGAG
CAGGTGCTCA CCCAGGTGCT GAGTGCGCCT CGTCAAGAGG TTGATGTGCA TACGCCAAAA
AAAAGGAATG GAATGGGAAG GCCTAGGATC AGTGACTCGA TAAAGCGCGA TTTGGGATGA
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| Protein sequence | MPRFRVLDAT SGLPSNVVRA MLQDAAGYLW LATSDGLARY DGTAFKVWRH DPNDPGSLPG
DSVLALYIDV QDRIWVLSEN AGLAVLDAQR RRFIQIPVGS VAKTDALHTL TGHGDAIWLS
DLHASVIRID SAGALTRYAL ADVSPTLKDT PVVALTFDAN GRLWVGTPDG LLYFEAGRLH
LAPPPLDKAS IHSIAAVGSR LWVGSTDGVY LQDAEGRWRA PNWGPMFAFG NLLLSVADAG
DGEFWLGSER GLWRTRQERP PVQIHLSDMH HGVSTVSSLW RDTSGGLWVP VYGRGLGYLR
QDWKRMAVVR PSDGGESSYC NVAPAAYSGG LWQLNRIGEL MHLNTSTGEL VHTGWQRHEL
RGVNITTTLE DSRGRLWLAN MQNGLSRLDL KNGQWREWAA HGDDAVPLYG PISWIVEMPD
SSLWLEALGV LQQRDLESGR VLNQIVPGSH GLDGSRVEQI GLGPDGRLWL AAGSGVYAWE
SQRRMFVPIP DLTGTRAYSF VPVGGNEVWV HRLRGLEQWR HSSHGWKRVA LVGPQHGLPA
MESLGMQHDA QGRIWLSTRR GLWRIDNTDE LQVRNFGLRD GLGTQEFAEA CLWMAPDGVL
VGGTTDGYLM LFDTAMPDPA PFVPQLRMET VSVIRAGRRI DFPVDRPFEL LPNDRQLIVG
ARLLSFGDPL SNRYSYWLKG FDTGWIDQGS SGTREFSSLP PADYTLLIQG TDPMGNLSRI
HLVTFRVLPP WWRSAWGMSV LTGSGLLLLW GVSWNYHRRL RRRARLQLEQ HQREVAERAS
LAKTQFLATL GHEVRTPMTG VLGMSELLLE TPLDTRQHGY ATSIQAVGKH LLRLVNDALD
LAKIEAGKLS LERRDFDFHA LLEQVVAMIR PMVERKGLRF VYRLDPEVPQ YVHGDADRLQ
QILLNLLINA TKFTEHGEVV LQVAPGQEQA CLGVRIDVVD TGPGLSEEQC QRLFRRFEQV
NGASTAARYG GSGLGLAICR ELATVMEGEI HVDSELGKGT CFRVLLPLPW VLAVQPAVAV
MDMEPSPCSN PLHLLLIEDD PTVAEVIVEL LRVRGHRVTH ALHGLEALVE VTLTRFDACL
CDLDLPGLDG AGLIVQLRAQ GQSFPIVVVT ARTDADARRQ AFQVGCDAFL RKPVTGEMLE
QVLTQVLSAP RQEVDVHTPK KRNGMGRPRI SDSIKRDLG
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